RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OR51T1Q8NGJ9 327 aa19.39■□□□□ 0.7
HOMER3-204ENST00000539827 NUDCD2Q8WVJ2 157 aa19.39■□□□□ 0.7
HOMER3-204ENST00000539827 URM1Q9BTM9 101 aaKnown RBP19.39■□□□□ 0.7
HOMER3-204ENST00000539827 CST11Q9H112 138 aa19.39■□□□□ 0.7
HOMER3-204ENST00000539827 GPR160Q9UJ42 338 aa19.39■□□□□ 0.7
HOMER3-204ENST00000539827 GTF3C1Q12789 2109 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 ANGPTL7O43827 346 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 AKAIN1P0CW23 69 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 MGMTP16455 207 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 ACTBP60709 375 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 RPS27AP62979 156 aaKnown RBP19.39■□□□□ 0.69
HOMER3-204ENST00000539827 ACTG1P63261 375 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 RTL6Q6ICC9 239 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 LHFPL2Q6ZUX7 228 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 TRAPPC6BQ86SZ2 158 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 MYPOPQ86VE0 399 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-204ENST00000539827 GABRG1Q8N1C3 465 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 ST6GAL2Q96JF0 529 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 SLC7A11Q9UPY5 501 aa19.39■□□□□ 0.69
HOMER3-204ENST00000539827 FAUP35544 74 aaKnown RBP19.38■□□□□ 0.69
HOMER3-204ENST00000539827 RBP2P50120 134 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 TMEM50BP56557 158 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 PLAC9Q5JTB6 97 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 ATAD3CQ5T2N8 411 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 ZNF782Q6ZMW2 699 aaPredicted RBP19.38■□□□□ 0.69
HOMER3-204ENST00000539827 NAXEQ8NCW5 288 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 OPN3Q9H1Y3 402 aaPredicted RBP19.38■□□□□ 0.69
HOMER3-204ENST00000539827 ZNF71Q9NQZ8 489 aaPredicted RBP19.38■□□□□ 0.69
HOMER3-204ENST00000539827 POU2F3Q9UKI9 436 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 CFAP47Q6ZTR5 3102 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 SVILO95425 2214 aa19.38■□□□□ 0.69
HOMER3-204ENST00000539827 MBD3L4A6NDZ8 208 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 MBD3L3A6NE82 208 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 MBD3L5A6NJ08 208 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 TNFSF13O75888 250 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 MELTFP08582 738 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 STEAP1BQ6NZ63 245 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 FAM180AQ6UWF9 173 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 CD163Q86VB7 1156 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 ZNF610Q8N9Z0 462 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 TMEM229BQ8NBD8 167 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 OR56B1Q8NGI3 324 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 OR56B4Q8NH76 319 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 MBD3L2Q8NHZ7 208 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 STARD4Q96DR4 205 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 RAB3CQ96E17 227 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 NUDT16L1Q9BRJ7 211 aaKnown RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 TP63Q9H3D4 680 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 PLSCR4Q9NRQ2 329 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 PROCRQ9UNN8 238 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 ARPC1BO15143 372 aaKnown RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 RRP8O43159 456 aaKnown RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 TOXO94900 526 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 IDH3GP51553 393 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 FUT6P51993 359 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 ATP1B3P54709 279 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 TAS2R19P59542 299 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 KCNJ8Q15842 424 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 ZBTB37Q5TC79 503 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 NCCRP1Q6ZVX7 275 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-204ENST00000539827 RFPL4BQ6ZWI9 263 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 RPRMLQ8N4K4 120 aa19.37■□□□□ 0.69
HOMER3-204ENST00000539827 M0QYG6 137 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 HTR3BO95264 441 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 CNOT4O95628 575 aaKnown RBP19.36■□□□□ 0.69
HOMER3-204ENST00000539827 ZNF14P17017 642 aaPredicted RBP19.36■□□□□ 0.69
HOMER3-204ENST00000539827 TBC1D28Q2M2D7 210 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 GVQW1Q8N7I0 195 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 ARHGAP5-AS1Q96IT6 56 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 DMRTB1Q96MA1 342 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 PAPOLGQ9BWT3 736 aaKnown RBP19.36■□□□□ 0.69
HOMER3-204ENST00000539827 C1QTNF6Q9BXI9 259 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 METTL9Q9H1A3 318 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 FAM215AQ9Y5M1 114 aa19.36■□□□□ 0.69
HOMER3-204ENST00000539827 SSX5O60225 188 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 COX5AP20674 150 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 RRAS2P62070 204 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CD83Q01151 205 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 PRDX4Q13162 271 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 SF3B4Q15427 424 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 C1orf185Q5T7R7 199 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 C3P1Q6ZMU1 363 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CDH24Q86UP0 819 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 OR4S1Q8NGB4 309 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 GIMAP1Q8WWP7 306 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 FAM122AQ96E09 287 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CPNE2Q96FN4 548 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 WBP1Q96G27 269 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 RANGRFQ9HD47 186 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 KCNK7Q9Y2U2 307 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 AGFG2O95081 481 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 RAB3DO95716 219 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CGAP01215 116 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 HIST1H1DP16402 221 aaKnown RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 RSU1Q15404 277 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CXorf67Q86X51 503 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 CCDC36Q8IYA8 594 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 FAM89BQ8N5H3 189 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 STEAP2Q8NFT2 490 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 BEST4Q8NFU0 473 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms