RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SOD3P08294 240 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 CD53P19397 219 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 TSTQ16762 297 aaKnown RBP13.18□□□□□ -0.3
DDB1-216ENST00000539739 MST1LQ2TV78 715 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 ALKBH6Q3KRA9 238 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 ZBTB37Q5TC79 503 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 Q6ZSR3 168 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 OR14K1Q8NGZ2 314 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 TSEN15Q8WW01 171 aaKnown RBP13.18□□□□□ -0.3
DDB1-216ENST00000539739 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 PGLYRP3Q96LB9 341 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 SLC22A4Q9H015 551 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
DDB1-216ENST00000539739 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
DDB1-216ENST00000539739 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 UPK1BO75841 260 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 ACKR3P25106 362 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 GNALP38405 381 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 TNK1Q13470 666 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 TRAM1Q15629 374 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 SYT6Q5T7P8 510 aaPredicted RBP13.17□□□□□ -0.3
DDB1-216ENST00000539739 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 MUL1Q969V5 352 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 SERPINA3P01011 423 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 CD8AP01732 235 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 CD2P06729 351 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 PRF1P14222 555 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 ZNF20P17024 532 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 PSMA1P25786 263 aaKnown RBP13.17□□□□□ -0.3
DDB1-216ENST00000539739 ZNF81P51508 661 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 MMP15P51511 669 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 DEFA1P59665 94 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 DEFA3P59666 94 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 TMEM255AQ5JRV8 349 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 C11orf71Q6IPW1 123 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 OR10AC1Q8NH08 325 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 THRSPQ92748 146 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 CCL19Q99731 98 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 TMED9Q9BVK6 235 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 PAPOLGQ9BWT3 736 aaKnown RBP13.17□□□□□ -0.3
DDB1-216ENST00000539739 MSL2Q9HCI7 577 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 ZNF275Q9NSD4 429 aaPredicted RBP13.17□□□□□ -0.3
DDB1-216ENST00000539739 AUP1Q9Y679 476 aa13.17□□□□□ -0.3
DDB1-216ENST00000539739 CRYBG3Q68DQ2 2970 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 CENPEQ02224 2701 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 APOA1P02647 267 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 FAHP16930 419 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
DDB1-216ENST00000539739 PPOXP50336 477 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 Q499Y3 187 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 ATAD3CQ5T2N8 411 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 PIGCQ92535 297 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 RGP1Q92546 391 aaPredicted RBP13.16□□□□□ -0.3
DDB1-216ENST00000539739 FGGYQ96C11 551 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 RHBDD3Q9Y3P4 386 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 CACNG2Q9Y698 323 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 A3GALT2U3KPV4 340 aa13.16□□□□□ -0.3
DDB1-216ENST00000539739 AKAP6Q13023 2319 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 GMDSO60547 372 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 LILRA1O75019 489 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 CST4P01036 141 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
DDB1-216ENST00000539739 CA6P23280 308 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 TNFSF4P23510 183 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 MAPK3P27361 379 aaPredicted RBP13.15□□□□□ -0.3
DDB1-216ENST00000539739 GABRA5P31644 462 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 SOX2P48431 317 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 OR8G1Q15617 311 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 PP6455Q8WZ26 134 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 PIGTQ969N2 578 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 TMEM203Q969S6 136 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 HIST1H2AAQ96QV6 131 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 VRK1Q99986 396 aaPredicted RBP13.15□□□□□ -0.3
DDB1-216ENST00000539739 CACNG6Q9BXT2 260 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
DDB1-216ENST00000539739 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
DDB1-216ENST00000539739 DSCAMO60469 2012 aa13.15□□□□□ -0.31
DDB1-216ENST00000539739 RAI1Q7Z5J4 1906 aaPredicted RBP13.14□□□□□ -0.31
DDB1-216ENST00000539739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.14□□□□□ -0.31
DDB1-216ENST00000539739 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
DDB1-216ENST00000539739 A6NIN4 97 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms