RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ADAM30Q9UKF2 790 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 IGKV1-27A0A075B6S5 117 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 FAM25AB3EWG3 89 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 FAM25CB3EWG5 89 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 FAM25GB3EWG6 89 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 IGHV3-13P01766 116 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 ARSBP15848 533 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 TNFSF8P32971 234 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 RANBP1P43487 201 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 MMP15P51511 669 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 SCAND1P57086 179 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 SELENOVP59797 346 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 C2orf76Q3KRA6 126 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 CRIP3Q6Q6R5 217 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 DMRTC2Q8IXT2 367 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-204ENST00000539721 OR5A2Q8NGI9 324 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 TNFAIP8L1Q8WVP5 186 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 OR5P3Q8WZ94 311 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 RNF170Q96K19 258 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 WDFY2Q96P53 400 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 MRPL37Q9BZE1 423 aaKnown RBP13.81□□□□□ -0.2
TRAF3-204ENST00000539721 FGF23Q9GZV9 251 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-204ENST00000539721 KCNK15Q9H427 330 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 RNF115Q9Y4L5 304 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 ETV7Q9Y603 341 aa13.81□□□□□ -0.2
TRAF3-204ENST00000539721 LOC100289279A0A1B0GTE1 492 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 PQLC2LA1A4F0 135 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 C19orf84I3L1E1 186 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 BMP4P12644 408 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 GPM6AP51674 278 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 CAPZA1P52907 286 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 OR8G1Q15617 311 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 UBE2NLQ5JXB2 153 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 GLIPR1L1Q6UWM5 242 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 S100ZQ8WXG8 99 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 MRPL24Q96A35 216 aaKnown RBP13.8□□□□□ -0.2
TRAF3-204ENST00000539721 PIK3IP1Q96FE7 263 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 DIRAS2Q96HU8 199 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 MICU1Q9BPX6 476 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 SLC22A4Q9H015 551 aa13.8□□□□□ -0.2
TRAF3-204ENST00000539721 IGLV3-9A0A075B6K5 115 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 OR5B21A6NL26 309 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 ZNF732B4DXR9 585 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 SIAH2O43255 324 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 BPNT1O95861 308 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 EIF4EP06730 217 aaKnown RBP13.79□□□□□ -0.2
TRAF3-204ENST00000539721 ELK1P19419 428 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 PTGFRP43088 359 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 CCDC190Q86UF4 302 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 LRRC28Q86X40 367 aaPredicted RBP13.79□□□□□ -0.2
TRAF3-204ENST00000539721 S100A13Q99584 98 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 RTL8AQ9BWD3 113 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 AKIP1Q9NQ31 210 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 MYEF2Q9P2K5 600 aaKnown RBP13.79□□□□□ -0.2
TRAF3-204ENST00000539721 ING4Q9UNL4 249 aa13.79□□□□□ -0.2
TRAF3-204ENST00000539721 NOP16Q9Y3C1 178 aaKnown RBP13.79□□□□□ -0.2
TRAF3-204ENST00000539721 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-204ENST00000539721 TMEM272A0A1B0GTI8 110 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 VSTM5A8MXK1 200 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 H0YL77 283 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 PLATP00750 562 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 TMEM225BP0DP42 221 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 ZP1P60852 638 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 GNG3P63215 75 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 ADIPOQQ15848 244 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 SPANXN2Q5MJ10 180 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 Q6ZR03 302 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 OR13G1Q8NGZ3 307 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 CMTM3Q96MX0 182 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 MSL2Q9HCI7 577 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 TAAR3PQ9P1P4 343 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 ANKHD1Q8IWZ3 2542 aaKnown RBP13.78□□□□□ -0.2
TRAF3-204ENST00000539721 SPTBN1Q01082 2364 aaKnown RBP13.78□□□□□ -0.2
TRAF3-204ENST00000539721 FAM208BQ5VWN6 2430 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 MLNRO43193 412 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 SPRY1O43609 319 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-204ENST00000539721 PLAUP00749 431 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 APOA1P02647 267 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 INHBBP09529 407 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 OR4A8P0C604 315 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 UBBP0CG47 229 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 RNF224P0DH78 156 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 ART1P52961 327 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 PLA2G7Q13093 441 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 CNIH2Q6PI25 160 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 MFSD4AQ8N468 514 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 OR10AD1Q8NGE0 317 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 SLC25A38Q96DW6 304 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 PLK3Q9H4B4 646 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-204ENST00000539721 RHBDL2Q9NX52 303 aa13.78□□□□□ -0.2
TRAF3-204ENST00000539721 WIPF3A6NGB9 483 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms