RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 HSD17B12Q53GQ0 312 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 TMEM42Q69YG0 159 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 CRIP3Q6Q6R5 217 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 LINC00299Q6ZSB3 139 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 CROCCP3Q8IVE0 287 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF525Q8N782 197 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 OR2Z1Q8NG97 314 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 OR13C5Q8NGS8 318 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 OR14A2Q96R54 314 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 PPIL3Q9H2H8 161 aaKnown RBP11□□□□□ -0.65
CCDC42-202ENST00000539522 MMP27Q9H306 513 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 MS4A5Q9H3V2 200 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 DYNLRB1Q9NP97 96 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 SNTG1Q9NSN8 517 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 NKIRAS2Q9NYR9 191 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 MRPL15Q9P015 296 aaKnown RBP11□□□□□ -0.65
CCDC42-202ENST00000539522 PMF1-BGLAPU3KQ54 211 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 DYSFO75923 2080 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 MAST4O15021 2626 aa11□□□□□ -0.65
CCDC42-202ENST00000539522 A0A096LNT2 108 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 TRBV5-7A0A0A0MS05 114 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 IGHV3-64DA0A0J9YX35 117 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 PDCD5O14737 125 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CLPXO76031 633 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CST4P01036 141 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CD2P06729 351 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF12P17014 697 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
CCDC42-202ENST00000539522 THBS2P35442 1172 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 PSMD7P51665 324 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 EFNA4P52798 201 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ATP5J2P56134 94 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 RNF144BQ7Z419 303 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 C11orf53Q8IXP5 236 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ITLN1Q8WWA0 313 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ITFG2Q969R8 447 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 SLC25A46Q96AG3 418 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ELMOD3Q96FG2 381 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 DERL3Q96Q80 235 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 NOX4Q9NPH5 578 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CYSLTR2Q9NS75 346 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 TMEM100Q9NV29 134 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CGGBP1Q9UFW8 167 aaPredicted RBP10.99□□□□□ -0.65
CCDC42-202ENST00000539522 DHDHQ9UQ10 334 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 ZANQ9Y493 2812 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 CR1P17927 2039 aa10.99□□□□□ -0.65
CCDC42-202ENST00000539522 IGKV1-9A0A0C4DH69 117 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 A0A1B0GVI7 797 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 A0A1W2PPK0 400 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF850A8MQ14 1090 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 PIN1P1O15428 100 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SYT7O43581 403 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SSX4O60224 188 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 DDOSTP39656 456 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SOX2P48431 317 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ART1P52961 327 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SELENOVP59797 346 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 MXD1Q05195 221 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 PRDX4Q13162 271 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 MPPED2Q15777 294 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 UBE2V2Q15819 145 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF404Q494X3 552 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 DOK3Q7L591 496 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 COMMD2Q86X83 199 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SEMA6DQ8NFY4 1073 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 OR13G1Q8NGZ3 307 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 MCFD2Q8NI22 146 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 TSEN15Q8WW01 171 aaKnown RBP10.98□□□□□ -0.65
CCDC42-202ENST00000539522 MEGF10Q96KG7 1140 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 OR2V2Q96R30 315 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 SLIRPQ9GZT3 109 aaKnown RBP10.98□□□□□ -0.65
CCDC42-202ENST00000539522 NXF2Q9GZY0 626 aaKnown RBP10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ZCCHC4Q9H5U6 513 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 TCF7L1Q9HCS4 588 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
CCDC42-202ENST00000539522 ZDHHC8Q9ULC8 765 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 PIGLQ9Y2B2 252 aa10.98□□□□□ -0.65
CCDC42-202ENST00000539522 A0A075B6Q4 140 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 IGHV4-30-2A0A087WSY4 118 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 PLSCR5A0PG75 271 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 VWC2LB2RUY7 222 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 TMEM127O75204 238 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 MTRF1O75570 445 aaKnown RBP10.97□□□□□ -0.65
CCDC42-202ENST00000539522 CLEC2LP0C7M8 214 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 DAOP14920 347 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 CD200P41217 278 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 MAP2K3P46734 347 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 TNFAIP6P98066 277 aaPredicted RBP10.97□□□□□ -0.65
CCDC42-202ENST00000539522 RIN1Q13671 783 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 MOGQ16653 247 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 FAM209AQ5JX71 171 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms