RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 ZDHHC23Q8IYP9 409 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 OR8B12Q8NGG6 310 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 GIPC3Q8TF64 312 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 THEM6Q8WUY1 208 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 ASB9Q96DX5 294 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 NLKQ9UBE8 527 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 SLC25A10Q9UBX3 287 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF391Q9UJN7 358 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 A0A1W2PRD5 423 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 A0A1W2PRF3 423 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 A0A1W2PRM7 423 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 SLC22A31A6NKX4 558 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 M0R1W7 72 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 PRODHO43272 600 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 TSPAN9O75954 239 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 TSPAN15O95858 294 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 CST1P01037 141 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 POU1F1P28069 291 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 SAA4P35542 130 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 CAV3P56539 151 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 GINS1Q14691 196 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 C1orf122Q6ZSJ8 110 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 KCTD8Q6ZWB6 473 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 KRT74Q7RTS7 529 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 TMEM179BQ7Z7N9 219 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 ADGRG5Q8IZF4 528 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 PNKDQ8N490 385 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 PIGCQ92535 297 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 UBE2FQ969M7 185 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 MED30Q96HR3 178 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 NSL1Q96IY1 281 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 RNF170Q96K19 258 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 CHID1Q9BWS9 393 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 NIPAL2Q9H841 368 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 TCF7L1Q9HCS4 588 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 TAS2R1Q9NYW7 299 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF222Q9UK12 451 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 LRP12Q9Y561 859 aa10.24□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF816-ZNF321PA0A0X1KG74 233 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 A0A1W2PQ09 198 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 MEIOCA2RUB1 952 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 RHBDL1O75783 438 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 ALX3O95076 343 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 PAHP00439 452 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 ACAA1P09110 424 aaPredicted RBP10.23□□□□□ -0.77
VAMP1-206ENST00000538970 NDUFB7P17568 137 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 ALOX5APP20292 161 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 TGFBR2P37173 567 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 UBE2E1P51965 193 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 ACSM1Q08AH1 577 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 SLC35D3Q5M8T2 416 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 NCR3LG1Q68D85 454 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 BBS1Q8NFJ9 593 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 OR5R1Q8NH85 324 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 CCDC124Q96CT7 223 aaKnown RBP10.23□□□□□ -0.77
VAMP1-206ENST00000538970 LRGUKQ96M69 825 aa10.23□□□□□ -0.77
VAMP1-206ENST00000538970 METTL8Q9H825 291 aaKnown RBP10.23□□□□□ -0.77
VAMP1-206ENST00000538970 ELL3Q9HB65 397 aaPredicted RBP10.23□□□□□ -0.77
VAMP1-206ENST00000538970 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 OSMP13725 252 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 CALB2P22676 271 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 SLC2A5P22732 501 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 GLRA1P23415 457 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 GPM6AP51674 278 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 CDK5Q00535 292 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 CEP78Q5JTW2 689 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 HCP5Q6MZN7 132 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 TRPM8Q7Z2W7 1104 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 KRT77Q7Z794 578 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 CPOQ8IVL8 374 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 PAPD5Q8NDF8 572 aaKnown RBP10.22□□□□□ -0.77
VAMP1-206ENST00000538970 BEND2Q8NDZ0 799 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 FAM81AQ8TBF8 368 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 DUS3LQ96G46 650 aaKnown RBP10.22□□□□□ -0.77
VAMP1-206ENST00000538970 CLPTM1LQ96KA5 538 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 HIST1H2AAQ96QV6 131 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 OR51I2Q9H344 312 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 FAM206AQ9NX38 181 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 LAMP5Q9UJQ1 280 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 MAB21L2Q9Y586 359 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 WNK1Q9H4A3 2382 aa10.22□□□□□ -0.77
VAMP1-206ENST00000538970 TRBV23-1A0A0A0MS06 115 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 A0A0U1RQV5 110 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF732B4DXR9 585 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 H3BUX3 64 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 HMGN1P05114 100 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 T-ENOLP0DO92 83 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 PSG2P11465 335 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 MAP2K3P46734 347 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 GABRA2P47869 451 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 RPS7P62081 194 aaKnown RBP10.21□□□□□ -0.77
VAMP1-206ENST00000538970 GNG3P63215 75 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 EGR3Q06889 387 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 BLMHQ13867 455 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 C2orf68Q2NKX9 166 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 CEACAM21Q3KPI0 293 aa10.21□□□□□ -0.77
VAMP1-206ENST00000538970 DEGS2Q6QHC5 323 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms