RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PRKACBP22694 351 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 P2RY14Q15391 338 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 OR8G1Q15617 311 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 RAB11BQ15907 218 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 CROCCP3Q8IVE0 287 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 ZNF671Q8TAW3 534 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 AP3S1Q92572 193 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
CD4-208ENST00000538827 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 MRPL37Q9BZE1 423 aaKnown RBP12.09□□□□□ -0.47
CD4-208ENST00000538827 ZNF442Q9H7R0 627 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
CD4-208ENST00000538827 MYEF2Q9P2K5 600 aaKnown RBP12.09□□□□□ -0.47
CD4-208ENST00000538827 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 A0A0B4J203 849 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 VSTM5A8MXK1 200 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 PLATP00750 562 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 ZNF250P15622 560 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 IGFBP2P18065 325 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 ZNF93P35789 620 aaPredicted RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 POU3F4P49335 361 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 PSMD7P51665 324 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 CLDN12P56749 244 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 ZNF404Q494X3 552 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 ZNF529Q6P280 563 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 OR8G5Q8NG78 346 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 OR5D18Q8NGL1 313 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 GTF3AQ92664 365 aaKnown RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 LURAP1Q96LR2 239 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 METTL17Q9H7H0 456 aaPredicted RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 ABCB9Q9NP78 766 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 TAAR3PQ9P1P4 343 aa12.08□□□□□ -0.48
CD4-208ENST00000538827 KLF2Q9Y5W3 355 aaPredicted RBP12.08□□□□□ -0.48
CD4-208ENST00000538827 PLSCR5A0PG75 271 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 IFITM5A6NNB3 132 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 E7EQL1 145 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 AIPO00170 330 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 OR4A8P0C604 315 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
CD4-208ENST00000538827 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
CD4-208ENST00000538827 ALDH3B1P43353 468 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 OR3A4PP47883 348 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 GPM6AP51674 278 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 ATP1B3P54709 279 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 ADIPOQQ15848 244 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 AWAT2Q6E213 333 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
CD4-208ENST00000538827 LGALS14Q8TCE9 139 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 TNFAIP8L1Q8WVP5 186 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 FOXRED1Q96CU9 486 aaPredicted RBP12.07□□□□□ -0.48
CD4-208ENST00000538827 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
CD4-208ENST00000538827 RNF170Q96K19 258 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 SORCS2Q96PQ0 1159 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 STEAP1Q9UHE8 339 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 ITGB1BP2Q9UKP3 347 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 PMF1-BGLAPU3KQ54 211 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 TACC2O95359 2948 aa12.07□□□□□ -0.48
CD4-208ENST00000538827 IGLV3-9A0A075B6K5 115 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 ZSCAN5BA6NJL1 495 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 H0YL77 283 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 SLC17A2O00624 439 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 RGS5O15539 181 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 ALDOBP05062 364 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 HTR2CP28335 458 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 RBP2P50120 134 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 FUT6P51993 359 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 MTCP1P56278 107 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 KISS1Q15726 138 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
CD4-208ENST00000538827 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 OR2Z1Q8NG97 314 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 OR6M1Q8NGM8 313 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 FGF23Q9GZV9 251 aaPredicted RBP12.06□□□□□ -0.48
CD4-208ENST00000538827 KCNK15Q9H427 330 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
CD4-208ENST00000538827 COMMD3Q9UBI1 195 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 MRPS28Q9Y2Q9 187 aaKnown RBP12.06□□□□□ -0.48
CD4-208ENST00000538827 NOP16Q9Y3C1 178 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms