RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 DCTDP32321 178 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 MNAT1P51948 309 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 HCCSP53701 268 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 GUCA2AQ02747 115 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 SNCBQ16143 134 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 DMRTC1Q5HYR2 192 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 DHRS7BQ6IAN0 325 aaPredicted RBP6.92□□□□□ -1.3
USP28-203ENST00000537490 HCP5Q6MZN7 132 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 CPOQ8IVL8 374 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 ADGRG5Q8IZF4 528 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 ARHGAP24Q8N264 748 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 OR8B12Q8NGG6 310 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 LRTOMTQ8WZ04 291 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 MED30Q96HR3 178 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 CLPTM1LQ96KA5 538 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 CHID1Q9BWS9 393 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 DNTTIP1Q9H147 329 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 MUC13Q9H3R2 512 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
USP28-203ENST00000537490 NLKQ9UBE8 527 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 SLC25A10Q9UBX3 287 aaPredicted RBP6.92□□□□□ -1.3
USP28-203ENST00000537490 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 MAB21L2Q9Y586 359 aa6.92□□□□□ -1.3
USP28-203ENST00000537490 IGKV1D-17A0A075B6S4 117 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 MEIOCA2RUB1 952 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 BTBD17A6NE02 478 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ARRDC5A6NEK1 342 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 NKX6-3A6NJ46 265 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 SLC22A31A6NKX4 558 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 OR2AT4A6NND4 320 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 M0R1W7 72 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 PSMD9O00233 223 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 SIGLEC5O15389 551 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 T-ENOLP0DO92 83 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 NDUFB7P17568 137 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ALOX5APP20292 161 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 PAICSP22234 425 aaKnown RBP6.91□□□□□ -1.3
USP28-203ENST00000537490 PRKACGP22612 351 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 GLRA1P23415 457 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 SAA4P35542 130 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 TGFBR2P37173 567 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 GABRA2P47869 451 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 GPM6AP51674 278 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 UBE2E1P51965 193 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 CAV3P56539 151 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 PSMA6P60900 246 aaKnown RBP6.91□□□□□ -1.3
USP28-203ENST00000537490 CDK5Q00535 292 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 EGR3Q06889 387 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 GK3PQ14409 553 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 TMEM236Q5W0B7 351 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 SLC35E4Q6ICL7 350 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 C1orf122Q6ZSJ8 110 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 KRT74Q7RTS7 529 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ZDHHC23Q8IYP9 409 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 HS3ST5Q8IZT8 346 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 FTMTQ8N4E7 242 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ZNRF1Q8ND25 227 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 BBS1Q8NFJ9 593 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 CANT1Q8WVQ1 401 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 C17orf50Q8WW18 174 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 PPP1R14AQ96A00 147 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 CCDC124Q96CT7 223 aaKnown RBP6.91□□□□□ -1.3
USP28-203ENST00000537490 DUS3LQ96G46 650 aaKnown RBP6.91□□□□□ -1.3
USP28-203ENST00000537490 HIST1H2AAQ96QV6 131 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 PPA2Q9H2U2 334 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 OR51I2Q9H344 312 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 NIPAL2Q9H841 368 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ABCB9Q9NP78 766 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 ZNF222Q9UK12 451 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 LRP12Q9Y561 859 aa6.91□□□□□ -1.3
USP28-203ENST00000537490 A0A1W2PQ09 198 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PRR32B1ATL7 298 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 ZNF732B4DXR9 585 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PRODHO43272 600 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PAHP00439 452 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 HMGN1P05114 100 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PSG2P11465 335 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 OSMP13725 252 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 SLC2A5P22732 501 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PAX6P26367 422 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 MAP2K3P46734 347 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 RPS7P62081 194 aaKnown RBP6.9□□□□□ -1.3
USP28-203ENST00000537490 GNG3P63215 75 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 ACSM1Q08AH1 577 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 CEP78Q5JTW2 689 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 SLC35D3Q5M8T2 416 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 HIST2H2BDQ6DRA6 164 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 MOB3CQ70IA8 216 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 KRT77Q7Z794 578 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 C1QL4Q86Z23 238 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 OR5R1Q8NH85 324 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 FAM110DQ8TAY7 271 aaPredicted RBP6.9□□□□□ -1.3
USP28-203ENST00000537490 AQP3Q92482 292 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 RORBQ92753 470 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 ASB9Q96DX5 294 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 AJUBAQ96IF1 538 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 LRGUKQ96M69 825 aa6.9□□□□□ -1.3
USP28-203ENST00000537490 METTL8Q9H825 291 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms