RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 GIFP27352 417 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 HLA-DMAP28067 261 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 OTX1P32242 354 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 SLC6A9P48067 706 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 SNTB2Q13425 540 aaKnown RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 RSPO1Q2MKA7 263 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF529Q6P280 563 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 BEND4Q6ZU67 534 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 DOK3Q7L591 496 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 NAA40Q86UY6 237 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 OR52N4Q8NGI2 321 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 OR4D6Q8NGJ1 314 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 OR13C9Q8NGT0 318 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 SLC7A6Q92536 515 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 TMEM45BQ96B21 275 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 PIK3IP1Q96FE7 263 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 PGAM5Q96HS1 289 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 FAM71F1Q96KD3 344 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ACTR6Q9GZN1 396 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 PLEKHF2Q9H8W4 249 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 NUDT15Q9NV35 164 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 KLK11Q9UBX7 282 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ALX3O95076 343 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 CST2P09228 141 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 B4GALT1P15291 398 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 RAB25P57735 213 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 AP3S2P59780 193 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 CEACAM16Q2WEN9 425 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 TBRG1Q3YBR2 411 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 FAM209AQ5JX71 171 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 DNM1P46Q6ZS02 220 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 S100PBPQ96BU1 408 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 CACNG6Q9BXT2 260 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ATG5Q9H1Y0 275 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 CNTD2Q9H8S5 307 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 GPR35Q9HC97 309 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 MRPL15Q9P015 296 aaKnown RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 COPZ2Q9P299 210 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF221Q9UK13 617 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 NOSIPQ9Y314 301 aaKnown RBP10.33□□□□□ -0.76
CLIP1-208ENST00000537004 RHBDD3Q9Y3P4 386 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 ACANP16112 2415 aa10.33□□□□□ -0.76
CLIP1-208ENST00000537004 TRAV6A0A075B6T7 132 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 C5orf63A6NC05 138 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 M0R135 149 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 LDLRAD4O15165 306 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 SGCEO43556 437 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 LYZL6O75951 148 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 APOC1P02654 83 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 TCRBP04435 133 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 ERCC1P07992 297 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-208ENST00000537004 CCR6P51684 374 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 CAPZA1P52907 286 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 BTG1P62324 171 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 RAB35Q15286 201 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 ATAD3CQ5T2N8 411 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 PGAP1Q75T13 922 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 SLC22A24Q8N4F4 322 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 ASCC1Q8N9N2 400 aaKnown RBP10.32□□□□□ -0.76
CLIP1-208ENST00000537004 SPTSSAQ969W0 71 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF799Q96GE5 643 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 MED30Q96HR3 178 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 FOXB1Q99853 325 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 UQCC2Q9BRT2 126 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 METTL17Q9H7H0 456 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-208ENST00000537004 GP6Q9HCN6 339 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 NUBP2Q9Y5Y2 271 aa10.32□□□□□ -0.76
CLIP1-208ENST00000537004 A0A0U1RQV5 110 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 ANKRD20A5PA0PJZ0 165 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF724A8MTY0 619 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 A8MV72 311 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 MRPL33O75394 65 aaKnown RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 IGLV3-1P01715 115 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 DBHP09172 617 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 PSMB1P20618 241 aaKnown RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 CRYGSP22914 178 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 OR3A2P47893 321 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 TESK1Q15569 626 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 SFRP5Q5T4F7 317 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF100Q8IYN0 542 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 PTX4Q96A99 478 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 LYZL4Q96KX0 146 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 SLCO5A1Q9H2Y9 848 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 HRASLSQ9HDD0 168 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 EMC3Q9P0I2 261 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 MYEF2Q9P2K5 600 aaKnown RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 CADP27708 2225 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 SYNGR3O43761 229 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 LOXP28300 417 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-208ENST00000537004 SCRN3Q0VDG4 424 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 TMEM255AQ5JRV8 349 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF774Q6NX45 483 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 Q6ZT83 130 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms