RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PLCXD3Q63HM9 321 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 CROCCP3Q8IVE0 287 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 C11orf53Q8IXP5 236 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 ZBTB8BQ8NAP8 495 aaPredicted RBP10.17□□□□□ -0.78
CHD4-203ENST00000535717 OR1M1Q8NGA1 313 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 OR13C3Q8NGS6 347 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 ERGIC1Q969X5 290 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 FGGYQ96C11 551 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 DGCR14Q96DF8 476 aaKnown RBP10.17□□□□□ -0.78
CHD4-203ENST00000535717 SMIM19Q96E16 107 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 ADAT3Q96EY9 351 aaPredicted RBP10.17□□□□□ -0.78
CHD4-203ENST00000535717 RNF170Q96K19 258 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 HIST1H2AAQ96QV6 131 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 OR5M11Q96RB7 305 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 RTL8AQ9BWD3 113 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 YTHDF1Q9BYJ9 559 aaKnown RBP10.17□□□□□ -0.78
CHD4-203ENST00000535717 COMMD4Q9H0A8 199 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 FN3KRPQ9HA64 309 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 GPR173Q9NS66 373 aa10.17□□□□□ -0.78
CHD4-203ENST00000535717 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
CHD4-203ENST00000535717 IGHV4-61A0A0C4DH41 118 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 ANKRD61A6NGH8 418 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 TMEM178BH3BS89 294 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 IFNL4K9M1U5 179 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 WNT9BO14905 357 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 CYB5R3P00387 301 aaPredicted RBP10.16□□□□□ -0.78
CHD4-203ENST00000535717 GPM6AP51674 278 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 TAS2R43P59537 309 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 GABARAPL2P60520 117 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 ACSM1Q08AH1 577 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 SPHARQ15513 63 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 UBE2V2Q15819 145 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 AVPI1Q5T686 147 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 ZNF826PQ6ZT77 177 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 KCTD8Q6ZWB6 473 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 MAPK1IP1LQ8NDC0 245 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 OR5A2Q8NGI9 324 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 Q8TCH9 128 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 GHSRQ92847 366 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 C10orf35Q96D05 121 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 COX4I2Q96KJ9 171 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 PGLYRP3Q96LB9 341 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 CHST5Q9GZS9 411 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 RBM38Q9H0Z9 239 aaKnown RBP10.16□□□□□ -0.78
CHD4-203ENST00000535717 C1orf123Q9NWV4 160 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 ZNF281Q9Y2X9 895 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 WIPI2Q9Y4P8 454 aa10.16□□□□□ -0.78
CHD4-203ENST00000535717 PNMA8CA0A1B0GUJ8 204 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 A6NLC8 198 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 TMEM210A6NLX4 147 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 LRRC30A6NM36 301 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 ZNF732B4DXR9 585 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 SMAD7O15105 426 aaKnown RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 PLPP2O43688 288 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 CD99P14209 185 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 ZNF20P17024 532 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 CELP19835 753 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 USF1P22415 310 aaPredicted RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 GNG3P63215 75 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 BDH1Q02338 343 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 LOXL1Q08397 574 aaPredicted RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 ZNF154Q13106 437 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 MED22Q15528 200 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 ZNF181Q2M3W8 571 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 FAM76BQ5HYJ3 339 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 OR13C5Q8NGS8 318 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 OR11L1Q8NGX0 322 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 GPR148Q8TDV2 347 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 TSEN15Q8WW01 171 aaKnown RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 PP6455Q8WZ26 134 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 RPL3LQ92901 407 aaKnown RBP10.15□□□□□ -0.78
CHD4-203ENST00000535717 HPS1Q92902 700 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 RAB1CQ92928 201 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 TIMD4Q96H15 378 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 TLNRD1Q9H1K6 362 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 OR51I2Q9H344 312 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 DHDHQ9UQ10 334 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 NPTNQ9Y639 398 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 CR1P17927 2039 aa10.15□□□□□ -0.78
CHD4-203ENST00000535717 TLN2Q9Y4G6 2542 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 IGKV1-9A0A0C4DH69 117 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 PQLC2LA1A4F0 135 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 LRP5LA4QPB2 252 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 OR5B21A6NL26 309 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 CDIPTO14735 213 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 MRPS14O60783 128 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 GATBO75879 557 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 ZNF205O95201 554 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 SERPINA3P01011 423 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 IGHV2-70P01814 119 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 CD1AP06126 327 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 IRF2P14316 349 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 RPL5P46777 297 aaKnown RBP10.14□□□□□ -0.79
CHD4-203ENST00000535717 SOX2P48431 317 aa10.14□□□□□ -0.79
CHD4-203ENST00000535717 RPS11P62280 158 aaKnown RBP eCLIP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms