RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 NEBP20929 6669 aa3.28□□□□□ -1.88
ECHDC1-223ENST00000534442 A0A1B0GU03 582 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 ATP6V1G2-DDX39BF2Z307 99 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 H3BMQ9 156 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 M0R1B8 84 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 RHBDL1O75783 438 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 LYZL6O75951 148 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 ETHE1O95571 254 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 OR4A8P0C604 315 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 GGT1P19440 569 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 AGTR1P30556 359 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 TGFBR2P37173 567 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 TAGLN2P37802 199 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 COILP38432 576 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 MAGEA8P43361 318 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 P2RY1P47900 373 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 RIPPLY1Q0D2K3 151 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 RAB40BQ12829 278 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 STX4Q12846 297 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 SLAMF1Q13291 335 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 ITIH4Q14624 930 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 KCNJ11Q14654 390 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 PAFAH1B3Q15102 231 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 TMED2Q15363 201 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 EXOC3L4Q17RC7 722 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 BOLA3Q53S33 107 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 Q6ZT83 130 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 APTXQ7Z2E3 356 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 PHF13Q86YI8 300 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 CA13Q8N1Q1 262 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 LYPD1Q8N2G4 141 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 OR13C4Q8NGS5 318 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 OR9A1PQ8NGU1 263 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 OR1F12Q8NHA8 337 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 FAM110BQ8TC76 370 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 AENQ8WTP8 325 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 C7orf34Q96L11 122 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 FOPNLQ96NB1 174 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 CCT7Q99832 543 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 TSSK1BQ9BXA7 367 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 GON7Q9BXV9 100 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 GLIPR2Q9H4G4 154 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 LRRC40Q9H9A6 602 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 DKKL1Q9UK85 242 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 MCTS1Q9ULC4 181 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 RABL2BQ9UNT1 228 aa3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 ZNF256Q9Y2P7 627 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 RRP15Q9Y3B9 282 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-223ENST00000534442 FCN1O00602 326 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 CTNSO60931 367 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 ICOSLGO75144 302 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 TSC22D2O75157 780 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 GNA14O95837 355 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 IGKV3-11P04433 115 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 CD55P08174 381 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 H2AFZP0C0S5 128 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 H2BFMP0C1H6 154 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 MAGEA1P43355 309 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 ADARB1P78563 741 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 GBE1Q04446 702 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 SERTAD2Q14140 314 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 PDK3Q15120 406 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 RESP18Q5W5W9 173 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 NCBP2-AS2Q69YL0 99 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 TMEM225Q6GV28 225 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 RNF165Q6ZSG1 346 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 PLCZ1Q86YW0 608 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 C15orf54Q8N8G6 183 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 BBOF1Q8ND07 529 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 OR8J1Q8NGP2 316 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 VN1R17PQ8TDU5 208 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 TRUB1Q8WWH5 349 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 IL1F10Q8WWZ1 152 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 RDH5Q92781 318 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 COQ2Q96H96 371 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 OR5B2Q96R09 309 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 OSBPL11Q9BXB4 747 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 DYNLRB1Q9NP97 96 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 CA10Q9NS85 328 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 UFSP2Q9NUQ7 469 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 PAQR5Q9NXK6 330 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 SENP1Q9P0U3 644 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 RPH3ALQ9UNE2 315 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 SAMD4AQ9UPU9 718 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 INSIG2Q9Y5U4 225 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 SLC25A15Q9Y619 301 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 TNXBP22105 4242 aa3.26□□□□□ -1.89
ECHDC1-223ENST00000534442 TRAV26-1A0A087WT03 109 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 IQANK1A0A1B0GTG1 560 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 E9PLD3 99 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 TRAPPC2LH3BP13 241 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 CCL22O00626 93 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 TPST2O60704 377 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 YEATS4O95619 227 aa3.25□□□□□ -1.89
ECHDC1-223ENST00000534442 TBX6O95947 436 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms