RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
CAPN1-227ENST00000533909 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-227ENST00000533909 INPP5EQ9NRR6 644 aa11.2□□□□□ -0.62
CAPN1-227ENST00000533909 EXOGQ9Y2C4 368 aaKnown RBP11.2□□□□□ -0.62
CAPN1-227ENST00000533909 IGHV3OR15-7A0A075B7D8 119 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 IRGMA1A4Y4 181 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 DHRS7CA6NNS2 312 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 SERPINA3P01011 423 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 IGLV3-1P01715 115 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 GYPAP02724 150 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 OCM2P0CE71 109 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-227ENST00000533909 OR12D2P58182 307 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 ELF3P78545 371 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-227ENST00000533909 CDONQ4KMG0 1287 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 ZNF691Q5VV52 312 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 LHFPL3Q86UP9 236 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 SCCPDHQ8NBX0 429 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 OR5A2Q8NGI9 324 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 C4orf36Q96KX1 117 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 SLC7A11Q9UPY5 501 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 V9GYS6 101 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
CAPN1-227ENST00000533909 LOC105371242A0A075B767 164 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 A0A1B0GTI1 187 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 ANKRD61A6NGH8 418 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 A6NIN4 97 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 A8MXK9 166 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 J3QRE1 110 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 DLGAP1O14490 977 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 TMPRSS2O15393 492 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 GATBO75879 557 aaKnown RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 CLIC3O95833 236 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 LHBP01229 141 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 ZNF20P17024 532 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 NPY4RP50391 375 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 IL18R1Q13478 541 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 MED21Q13503 144 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 GALEQ14376 348 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 OGFRL1Q5TC84 451 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 TMEM244Q5VVB8 128 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 CD276Q5ZPR3 534 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 HAGHLQ6PII5 290 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 C11orf53Q8IXP5 236 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 C8orf59Q8N0T1 100 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 PRSS35Q8N3Z0 413 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 ZNF676Q8N7Q3 588 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 OR10Z1Q8NGY1 313 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 OR14K1Q8NGZ2 314 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 OR2G2Q8NGZ5 317 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 ZNF671Q8TAW3 534 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 HPSE2Q8WWQ2 592 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 CHCHD3Q9NX63 227 aaKnown RBP11.18□□□□□ -0.62
CAPN1-227ENST00000533909 MYRFQ9Y2G1 1151 aa11.18□□□□□ -0.62
CAPN1-227ENST00000533909 NKX6-3A6NJ46 265 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 KIAA1324LA8MWY0 1029 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 CASQ2O14958 399 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 AKR7A2O43488 359 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 IGHA1P01876 353 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 EGR1P18146 543 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 MYL12AP19105 171 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 CCL1P22362 96 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 CAPGP40121 348 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 GBX2P52951 348 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 TEX36Q5VZQ5 186 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 WDR25Q64LD2 544 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 FAM90A1Q86YD7 464 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 SYS1Q8N2H4 156 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 OR52I1Q8NGK6 324 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 C12orf43Q96C57 262 aaKnown RBP11.17□□□□□ -0.62
CAPN1-227ENST00000533909 TMPRSS13Q9BYE2 586 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 OR51I2Q9H344 312 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
CAPN1-227ENST00000533909 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
CAPN1-227ENST00000533909 FAM230AA0A1W2PPH8 454 aa11.16□□□□□ -0.62
CAPN1-227ENST00000533909 SRRM5B3KS81 715 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms