RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RAB27BO00194 218 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 AKR7A2O43488 359 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PRSS23O95084 383 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 NQO2P16083 231 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 IGFBP6P24592 240 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SULT1A2P50226 295 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OR2B11Q5JQS5 317 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OR2A2Q6IF42 318 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TRAT1Q6PIZ9 186 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RELL2Q8NC24 303 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OR1F12Q8NHA8 337 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 CMBLQ96DG6 245 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 MRPS24Q96EL2 167 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PIK3IP1Q96FE7 263 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 C4orf45Q96LM5 186 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RHNO1Q9BSD3 238 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PARP12Q9H0J9 701 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RHOFQ9HBH0 211 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 MMP26Q9NRE1 261 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TNRC6CQ9HCJ0 1690 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RFC3P40938 356 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 TP53I13Q8NBR0 393 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 HMGCLL1Q8TB92 370 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 FOXB1Q99853 325 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RCL1Q9Y2P8 373 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 LOXL2Q9Y4K0 774 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 TMEM30CPA0ZSE6 113 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CLEC18AA5D8T8 446 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 LEUTXA8MZ59 168 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 HRO43593 1189 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 ITGBL1O95965 494 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 MDH2P40926 338 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CEBPEQ15744 281 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 IGFBP7Q16270 282 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 FAHD2BQ6P2I3 314 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 C19orf35Q6ZS72 473 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 REC114Q7Z4M0 266 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 HSD17B13Q7Z5P4 300 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CLEC18CQ8NCF0 446 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CADM4Q8NFZ8 388 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 FAHD2AQ96GK7 314 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SPACA5Q96QH8 159 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RBM38Q9H0Z9 239 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CROCCQ5TZA2 2017 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CRYM-AS1A6NIL9 109 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SLC22A20A6NK97 555 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CTDSPLO15194 276 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 MYOGP15173 224 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 HIST1H1DP16402 221 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 CCR2P41597 374 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 GFERP55789 205 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF141Q15928 474 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 Q7L0L9 218 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF683Q8IZ20 524 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 OR2D3Q8NGH3 330 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RAB24Q969Q5 203 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RAB40CQ96S21 281 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 MARVELD1Q9BSK0 173 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SLC6A13Q9NSD5 602 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 NHSQ6T4R5 1651 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 HMSDA8MTL9 139 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 B4E171 279 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 TNFSF11O14788 317 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SPNP16150 400 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 PI3P19957 117 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 AKR1C3P42330 323 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RPS27P42677 84 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 GNG3P63215 75 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 ERGIC1Q969X5 290 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 RPUSD4Q96CM3 377 aaKnown RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 FAM122AQ96E09 287 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 KTI12Q96EK9 354 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-236ENST00000533667 SIRT7Q9NRC8 400 aa6.29□□□□□ -1.4
CTNND1-236ENST00000533667 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 AQP7O14520 342 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 SFT2D2O95562 160 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 SLC25A6P12236 298 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 B4GALT1P15291 398 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 C4orf17Q53FE4 359 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 TDHQ8IZJ6 230 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 DUSP18Q8NEJ0 188 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 OR52N4Q8NGI2 321 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 SCMH1Q96GD3 660 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
CTNND1-236ENST00000533667 NXF2Q9GZY0 626 aaKnown RBP6.28□□□□□ -1.4
CTNND1-236ENST00000533667 ALX4Q9H161 411 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-236ENST00000533667 DEFB127Q9H1M4 99 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms