RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 COQ7Q99807 217 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CENPOQ9BU64 300 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 HDHD2Q9H0R4 259 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 FAM206AQ9NX38 181 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 B3GNT2Q9NY97 397 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 OPN4Q9UHM6 478 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 GTF2A1LQ9UNN4 478 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 N6AMT1Q9Y5N5 214 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 GABRPO00591 440 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 DBHP09172 617 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC2A1P11166 492 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CBR1P16152 277 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TGFBR1P36897 503 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 HTR5AP47898 357 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CX3CR1P49238 355 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TPTEP56180 551 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF121P58317 390 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 NCS1P62166 190 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 RPS11P62280 158 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 PLP2Q04941 152 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 SNTB2Q13425 540 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 INSL4Q14641 139 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 SPCS2Q15005 226 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ODF4Q2M2E3 257 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 KRTAP27-1Q3LI81 207 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ACSM3Q53FZ2 586 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 BCL2L15Q5TBC7 163 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 UNQ9370/PRO34162Q6UXP9 181 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CEACAM19Q7Z692 300 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 MDP1Q86V88 176 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF676Q8N7Q3 588 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 WFDC12Q8WWY7 111 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 YIPF5Q969M3 257 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 SPTSSAQ969W0 71 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 C1orf147Q96MC9 270 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 DCLRE1CQ96SD1 692 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 PBOV1Q9GZY1 135 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 RNF167Q9H6Y7 350 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TXNL4BQ9NX01 149 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 NUP50Q9UKX7 468 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 WNK1Q9H4A3 2382 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 IGHV2OR16-5A0A0B4J2B6 119 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 ACOD1A6NK06 481 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMEM212A6NML5 194 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 M0R135 149 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC22A1O15245 554 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 PIN1P1O15428 100 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 SERPINA3P01011 423 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 APOC1P02654 83 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 ACSM4P0C7M7 580 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 COX5BP10606 129 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 GALP22466 123 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 OTX1P32242 354 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 PSMA6P60900 246 aaKnown RBP9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 C22orf42Q6IC83 251 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 BRICD5Q6PL45 260 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 FAM57BQ71RH2 274 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 PRSS45Q7RTY3 260 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 ELMOD2Q8IZ81 293 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR13C5Q8NGS8 318 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 RGP1Q92546 391 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF799Q96GE5 643 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 CITED1Q99966 193 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 COMMD4Q9H0A8 199 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 GSTK1Q9Y2Q3 226 aa9.55□□□□□ -0.88
TRAPPC4-213ENST00000533149 LOC100509620A0A075B734 347 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 IQCMA0A1B0GVH7 501 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 C5orf63A6NC05 138 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 P2RY10O00398 339 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 RP2O75695 350 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 TTRP02766 147 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 SERPINA5P05154 406 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 ANXA2P07355 339 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 MAGEB1P43366 347 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC6A9P48067 706 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 SRSF4Q08170 494 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC9A3R2Q15599 337 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 GSG1Q2KHT4 349 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMEM244Q5VVB8 128 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 DRAM2Q6UX65 266 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR10AC1Q8NH08 325 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 NDNFQ8TB73 568 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 PGAM5Q96HS1 289 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF75AQ96N20 296 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 MRPL37Q9BZE1 423 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 MOB1AQ9H8S9 216 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 BEX1Q9HBH7 125 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF319Q9P2F9 582 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 NUFIP1Q9UHK0 495 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 ATPIF1Q9UII2 106 aa9.54□□□□□ -0.88
TRAPPC4-213ENST00000533149 TRBV5-5A0A0J9YX44 114 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 A0A1B0GTI1 187 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 A0A1W2PPK0 400 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 A0A1W2PPW3 197 aa9.53□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms