RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 ZNF680Q8NEM1 530 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 BEST4Q8NFU0 473 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OR2M7Q8NG81 312 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OR4D10Q8NGI6 311 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OR5M8Q8NGP6 311 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OR5M1Q8NGP8 315 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OR10D3Q8NH80 312 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 RAB3CQ96E17 227 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 MRPS24Q96EL2 167 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 PLPPR2Q96GM1 343 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 LYZL4Q96KX0 146 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 C20orf173Q96LM9 149 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 FER1L6-AS2Q96M78 137 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 FOXB1Q99853 325 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 PRDM14Q9GZV8 571 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 ARRDC1-AS1Q9H2J1 176 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 KCNK15Q9H427 330 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 SMOC1Q9H4F8 434 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 OPA3Q9H6K4 179 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 BCO1Q9HAY6 547 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 PARPBPQ9NWS1 579 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 IL36GQ9NZH8 169 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 ZNF319Q9P2F9 582 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 EIF3KQ9UBQ5 218 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 UBQLN2Q9UHD9 624 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 SLC23A1Q9UHI7 598 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 HSF4Q9ULV5 492 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 EDARQ9UNE0 448 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 KLF13Q9Y2Y9 288 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 MAB21L2Q9Y586 359 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 MED12Q93074 2177 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 COL6A3P12111 3177 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 MYO7BQ6PIF6 2116 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 KNTC1P50748 2209 aa4.99□□□□□ -1.61
ATPAF1-210ENST00000532925 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 AHCTF1Q8WYP5 2266 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A10PA6NDY2 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A18PA6NE21 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A16PA6NEW6 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A20PA6NIJ5 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A8PA6NJQ4 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A7PA6NKC0 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A22PA8MWA6 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A12PA8MX19 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A5PA8MXJ8 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A23PA8MXZ1 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 MCRIP1C9JLW8 97 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 STMND1H3BQB6 276 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 H3BSH0 61 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 AGRPO00253 132 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 CDX4O14627 284 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 RRP8O43159 456 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 LMX1BO60663 402 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 LRP3O75074 770 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 B3GALNT1O75752 331 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 NEURL1O76050 574 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 DUS4LO95620 317 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 WDPCPO95876 746 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 ACTL6AO96019 429 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 MT-CO3P00414 261 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 RLN1P04808 185 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 HCKP08631 526 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A15PP0C7V4 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A13PP0C7W8 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A14PP0C7W9 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FAM90A24PP0C7X0 464 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 SLC25A4P12235 298 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 ABOP16442 354 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 ZNF708P17019 499 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 ATF4P18848 351 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 NFYAP23511 347 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 DTYMKP23919 212 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 ZBTB25P24278 435 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 FPR2P25090 351 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 GDF1P27539 372 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 S100A11P31949 105 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 SLC6A9P48067 706 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 LHX2P50458 406 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 AP2S1P53680 142 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 SEC61A1P61619 476 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 CYCSP99999 105 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 DHRS2Q13268 280 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 OR8B8Q15620 311 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 KISS1Q15726 138 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 RSPO1Q2MKA7 263 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 C4orf46Q504U0 113 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 DCAF10Q5QP82 559 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 PHYHD1Q5SRE7 291 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 LIN54Q6MZP7 749 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 CRIP3Q6Q6R5 217 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 COLCA1Q6ZS62 124 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 CHMP1BQ7LBR1 199 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 AAED1Q7RTV5 226 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 LYG2Q86SG7 212 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 PEG10Q86TG7 708 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 HOGA1Q86XE5 327 aa4.98□□□□□ -1.61
ATPAF1-210ENST00000532925 SLC7A5P1Q8MH63 180 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms