RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 C11orf94C9JXX5 98 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 GOLGA8RI6L899 631 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 MANBAO00462 879 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 PSPHP1O15172 72 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 RAD51BO15315 384 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 ANGPTL7O43827 346 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 TNFAIP8O95379 198 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 IGHV1-8P0DP01 117 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 PAX6P26367 422 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 APLNRP35414 380 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 RAP1AP62834 184 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 IL5RAQ01344 420 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 IFITM3Q01628 133 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 NAB1Q13506 487 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 PNOCQ13519 176 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 BSXQ3C1V8 233 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 CDNFQ49AH0 187 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 CYB5R2Q6BCY4 276 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 BHLHA15Q7RTS1 189 aaPredicted RBP2.91□□□□□ -1.94
USP47-211ENST00000531513 ZNF738Q8NE65 137 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 C15orf40Q8WUR7 153 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 OR5P2Q8WZ92 322 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 RORBQ92753 470 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 ZNF514Q96K75 400 aaPredicted RBP2.91□□□□□ -1.94
USP47-211ENST00000531513 CAMK2N2Q96S95 79 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 SLC38A1Q9H2H9 487 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 HMG20AQ9NP66 347 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 IFT46Q9NQC8 304 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 DDIT4Q9NX09 232 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 RPS6KB2Q9UBS0 482 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 OR12D3Q9UGF7 316 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 SCML1Q9UN30 329 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 GPATCH8Q9UKJ3 1502 aaKnown RBP2.91□□□□□ -1.94
USP47-211ENST00000531513 ADAMTSL3P82987 1691 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 TRAV8-6A0A0B4J262 113 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 SMLR1H3BR10 107 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 GCM2O75603 506 aaPredicted RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 YIF1AO95070 293 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 RCBTB2O95199 551 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 IGKV1D-16P01601 117 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 KDELR2P33947 212 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 FLOT2Q14254 428 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 SNRNP35Q16560 246 aaKnown RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 C6orf99Q4VX62 202 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 HHATQ5VTY9 493 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 MFSD14CQ5VZR4 134 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 OPN5Q6U736 354 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 TRMT10CQ7L0Y3 403 aaKnown RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 MRPL52Q86TS9 123 aaKnown RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 MDP1Q86V88 176 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 CRLF3Q8IUI8 442 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 C12orf56Q8IXR9 622 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 SLC34A3Q8N130 599 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 GAPTQ8N292 157 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 ARIH2OSQ8N7S6 290 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 COQ8AQ8NI60 647 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 DCAKDQ8WVC6 231 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 ARL5BQ96KC2 179 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 KCNS1Q96KK3 526 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 ZNF488Q96MN9 340 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 ZNF251Q9BRH9 671 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 TMED9Q9BVK6 235 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 UPF3BQ9BZI7 483 aaKnown RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 C12orf10Q9HB07 376 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 PARVGQ9HBI0 331 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 DDX19AQ9NUU7 478 aaKnown RBP2.9□□□□□ -1.95
USP47-211ENST00000531513 ANXA10Q9UJ72 324 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 NEU3Q9UQ49 428 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 PSG11Q9UQ72 335 aa2.9□□□□□ -1.95
USP47-211ENST00000531513 IGHV1OR15-9A0A0B4J2B8 117 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 TMEM213A2RRL7 107 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 ZNF705GA8MUZ8 300 aaPredicted RBP2.89□□□□□ -1.95
USP47-211ENST00000531513 NDUFC2-KCTD14E9PQ53 114 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 M0QXV9 152 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 SULT1C2O00338 296 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 SHOX2O60902 331 aaPredicted RBP2.89□□□□□ -1.95
USP47-211ENST00000531513 RD3LP0DJH9 198 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 CDK5Q00535 292 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 MAPRE2Q15555 327 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 MPV17L2Q567V2 206 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 HBMQ6B0K9 141 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 BOD1L2Q8IYS8 172 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 RNF175Q8N4F7 328 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR8G5Q8NG78 346 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR6N1Q8NGY5 312 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR52P1PQ8NH57 321 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR51Q1Q8NH59 317 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 DDI1Q8WTU0 396 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 GHSRQ92847 366 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 CDS1Q92903 461 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 C18orf15Q96N68 181 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR4K3Q96R72 315 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 GGTLC1Q9BX51 225 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 SRRQ9GZT4 340 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 OR52D1Q9H346 318 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 METTL8Q9H825 291 aaKnown RBP2.89□□□□□ -1.95
USP47-211ENST00000531513 C12orf4Q9NQ89 552 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 NLE1Q9NVX2 485 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms