RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TMEM42Q69YG0 159 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 TMEM200AQ86VY9 491 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 MUC15Q8N387 334 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 THRSPQ92748 146 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 FBXW5Q969U6 566 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 ITPKCQ96DU7 683 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 GPER1Q99527 375 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 DHRS9Q9BPW9 319 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 SPOCK3Q9BQ16 436 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 PLGRKTQ9HBL7 147 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 DYNLRB1Q9NP97 96 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 TMEM100Q9NV29 134 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 MRPL15Q9P015 296 aaKnown RBP9.08□□□□□ -0.96
SOX6-213ENST00000530378 DAPK2Q9UIK4 370 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 FOXJ3Q9UPW0 622 aa9.08□□□□□ -0.96
SOX6-213ENST00000530378 RAI1Q7Z5J4 1906 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 CSMD2Q7Z408 3487 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 TRAV1-2A0A0B4J238 106 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 A0A0G2JK05 382 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 ZNF732B4DXR9 585 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 SPRY1O43609 319 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 CST4P01036 141 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 APOBEC3AP31941 199 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 OR3A4PP47883 348 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 GMFBP60983 142 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 HOXA4Q00056 320 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 DAZAP2Q15038 168 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 IDNKQ5T6J7 187 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 PRAMEF6Q5VXH4 476 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 ZNF529Q6P280 563 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 UTS2BQ765I0 119 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 WDR86Q86TI4 376 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 ANGPTL5Q86XS5 388 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 FBXL14Q8N1E6 418 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 CCDC54Q8NEL0 328 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 ELMOD3Q96FG2 381 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 BORCS8Q96FH0 119 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 RNF170Q96K19 258 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 BARHL1Q9BZE3 327 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 CLEC4MQ9H2X3 399 aaPredicted RBP9.07□□□□□ -0.96
SOX6-213ENST00000530378 NEK6Q9HC98 313 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 TMEM138Q9NPI0 162 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 SLC7A11Q9UPY5 501 aa9.07□□□□□ -0.96
SOX6-213ENST00000530378 M0R233 179 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 HS3ST1O14792 307 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 GRPP07492 148 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 SOD3P08294 240 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 TUBG1P23258 451 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 ZNF93P35789 620 aaPredicted RBP9.06□□□□□ -0.96
SOX6-213ENST00000530378 ZNF81P51508 661 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 MTCP1P56278 107 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 ZBTB37Q5TC79 503 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 SFXN4Q6P4A7 337 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 CALHM1Q8IU99 346 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 C1orf174Q8IYL3 243 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 DYNC2LI1Q8TCX1 351 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 OR5P3Q8WZ94 311 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 NRGNQ92686 78 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 HIST1H2AAQ96QV6 131 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 BCL7BQ9BQE9 202 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 TUBG2Q9NRH3 451 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 UFSP2Q9NUQ7 469 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 TREM2Q9NZC2 230 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 LAMP3Q9UQV4 416 aa9.06□□□□□ -0.96
SOX6-213ENST00000530378 ZNF701M0R085 212 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 PDCD5O14737 125 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 MAGEB3O15480 346 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ANGPTL7O43827 346 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 CTAG2O75638 210 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 IL1AP01583 271 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 CALCBP10092 127 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 HAAOP46952 286 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 MADCAM1Q13477 382 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 KISS1Q15726 138 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 CRIP3Q6Q6R5 217 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 METAP1DQ6UB28 335 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 OR4D6Q8NGJ1 314 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 OR13G1Q8NGZ3 307 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 SLC25A46Q96AG3 418 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 MICU1Q9BPX6 476 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 RTL8AQ9BWD3 113 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 PLEKHB1Q9UF11 243 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 PMF1-BGLAPU3KQ54 211 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 V9GY05 133 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ANKRD17O75179 2603 aaKnown RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 DYSFO75923 2080 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 LOC100289279A0A1B0GTE1 492 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 PQLC2LA1A4F0 135 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 A6NLC8 198 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 VSTM5A8MXK1 200 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 TPD52L2O43399 206 aaKnown RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 PAHP00439 452 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 IGHV1-46P01743 117 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ERCC1P07992 297 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms