RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 FBXO7Q9Y3I1 522 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ZNF708P17019 499 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 QRFPP83859 136 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 Q3ZCU0 254 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ACTBL2Q562R1 376 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ZNF519Q8TB69 540 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 MAFIPQ8WZ33 124 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 A0A0A6YYD4 124 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 A0A1B0GX78 115 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 A0A1W2PP11 408 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 NUDT21O43809 227 aaKnown RBP12.54□□□□□ -0.4
USP48-213ENST00000529637 NDUFB7P17568 137 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 HOXA5P20719 270 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 THBS4P35443 961 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 RPS10P46783 165 aaKnown RBP12.54□□□□□ -0.4
USP48-213ENST00000529637 TMEM33P57088 247 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 SLC26A5P58743 744 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 SSTP61278 116 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 LCN10Q6JVE6 187 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
USP48-213ENST00000529637 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 TMEM234Q8WY98 164 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 GNRHR2Q96P88 292 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 G6PC2Q9NQR9 355 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 OR52A1Q9UKL2 312 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 SOCS1O15524 211 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 RAD51DO75771 328 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 CD63P08962 238 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 RPS23P62266 143 aaKnown RBP12.53□□□□□ -0.4
USP48-213ENST00000529637 ROM1Q03395 351 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 C2orf50Q96LR7 162 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 CHST5Q9GZS9 411 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 UCK1Q9HA47 277 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
USP48-213ENST00000529637 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
USP48-213ENST00000529637 CST4P01036 141 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
USP48-213ENST00000529637 FCGR2CP31995 323 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 CFHR1Q03591 330 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
USP48-213ENST00000529637 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 SGK3Q96BR1 496 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
USP48-213ENST00000529637 PIAS2O75928 621 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 RAB5CP51148 216 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 TAS2R31P59538 309 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 RNF4P78317 190 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 DNM1P34Q6PK57 102 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 ADAT3Q96EY9 351 aaPredicted RBP12.52□□□□□ -0.4
USP48-213ENST00000529637 DUSP15Q9H1R2 295 aaPredicted RBP12.52□□□□□ -0.4
USP48-213ENST00000529637 DOK5Q9P104 306 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.4
USP48-213ENST00000529637 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 KNG1P01042 644 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 ZNF124Q15973 351 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 ZNF343Q6P1L6 599 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 SPNS3Q6ZMD2 512 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 OR10D4PQ8NGN7 298 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 MR1Q95460 341 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 BANF2Q9H503 90 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 PUS1Q9Y606 427 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP48-213ENST00000529637 A0A1W2PQD3 144 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 MASP2O00187 686 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 RAMP1O60894 148 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 RPS2P15880 293 aaKnown RBP12.52□□□□□ -0.41
USP48-213ENST00000529637 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
USP48-213ENST00000529637 HSPB2Q16082 182 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 PCK2Q16822 640 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 CARD17Q5XLA6 110 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 OR13G1Q8NGZ3 307 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 PTX4Q96A99 478 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 MALSU1Q96EH3 234 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 PRO1933Q9H354 126 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.41
USP48-213ENST00000529637 K7EPK0 472 aa12.51□□□□□ -0.41
USP48-213ENST00000529637 HEXBP07686 556 aa12.51□□□□□ -0.41
USP48-213ENST00000529637 EMP2P54851 167 aa12.51□□□□□ -0.41
USP48-213ENST00000529637 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
USP48-213ENST00000529637 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
USP48-213ENST00000529637 ANGPTL5Q86XS5 388 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms