RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ZNF367Q7RTV3 350 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 ZNF420Q8TAQ5 688 aaPredicted RBP11.83□□□□□ -0.52
USF1-209ENST00000529476 C10orf105Q8TEF2 133 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 CCL17Q92583 94 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 C10orf35Q96D05 121 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 RNF170Q96K19 258 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 Q96MF0 132 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 OPALINQ96PE5 141 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 MGLLQ99685 303 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 CHST5Q9GZS9 411 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 DLL4Q9NR61 685 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 PPP1R3CQ9UQK1 317 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 TRBV5-5A0A0J9YX44 114 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 PTBP3O95758 552 aaKnown RBP11.82□□□□□ -0.52
USF1-209ENST00000529476 CSF3P09919 207 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 OCM2P0CE71 109 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 GATA4P43694 442 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 GPM6AP51674 278 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 DSCR9P59020 149 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 MZT1Q08AG7 82 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 MLLT11Q13015 90 aaPredicted RBP11.82□□□□□ -0.52
USF1-209ENST00000529476 RIN1Q13671 783 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 YIF1BQ5BJH7 314 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 OR1M1Q8NGA1 313 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 OR5A2Q8NGI9 324 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 PP6455Q8WZ26 134 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 UFD1Q92890 307 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
USF1-209ENST00000529476 TRIM64BA6NI03 449 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 A6NLC8 198 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 GATBO75879 557 aaKnown RBP11.81□□□□□ -0.52
USF1-209ENST00000529476 CYB5R3P00387 301 aaPredicted RBP11.81□□□□□ -0.52
USF1-209ENST00000529476 SERPINA3P01011 423 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 CPEP16870 476 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 GIFP27352 417 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 GNG3P63215 75 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 ZNF154Q13106 437 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 GPR50Q13585 617 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 TPBGQ13641 420 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 ZNF826PQ6ZT77 177 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 UTS2BQ765I0 119 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 C11orf53Q8IXP5 236 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 PARP16Q8N5Y8 322 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 TRMT10AQ8TBZ6 339 aaKnown RBP11.81□□□□□ -0.52
USF1-209ENST00000529476 RPL3LQ92901 407 aaKnown RBP11.81□□□□□ -0.52
USF1-209ENST00000529476 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 ORAI1Q96D31 301 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 OR14A2Q96R54 314 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 TMED9Q9BVK6 235 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 ZNF696Q9H7X3 374 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 FN3KRPQ9HA64 309 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 C1orf123Q9NWV4 160 aa11.81□□□□□ -0.52
USF1-209ENST00000529476 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 IGKV1-9A0A0C4DH69 117 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 FAM230AA0A1W2PPH8 454 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 PQLC2LA1A4F0 135 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 OR5B21A6NL26 309 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 TMEM210A6NLX4 147 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 VWC2LB2RUY7 222 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 CLDN25C9JDP6 229 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 NDUFS8O00217 210 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 PPIHO43447 177 aaKnown RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 INMTO95050 263 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 CD2P06729 351 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 ATF1P18846 271 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 TMEM33P57088 247 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 RPS25P62851 125 aaKnown RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 INSL4Q14641 139 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 Q499Y3 187 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 ARMCX4Q5H9R4 360 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 FAM76BQ5HYJ3 339 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 ASPHD2Q6ICH7 369 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 Q71RC1 249 aaPredicted RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 SERPINA12Q8IW75 414 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 PHC2Q8IXK0 858 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 Q8TCH9 128 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 FCGR1BQ92637 280 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 NR1H4Q96RI1 486 aaPredicted RBP11.8□□□□□ -0.52
USF1-209ENST00000529476 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 BPESC1Q9GZL8 116 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 TLNRD1Q9H1K6 362 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 OR51I2Q9H344 312 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 ZCCHC4Q9H5U6 513 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 SLC7A11Q9UPY5 501 aa11.8□□□□□ -0.52
USF1-209ENST00000529476 A0A087WXM4 84 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 A0A1W2PPK0 400 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms