RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 SLC2A1P11166 492 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 KLK2P20151 261 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 PRKACBP22694 351 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 MPZP25189 248 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 CD96P40200 585 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 GMFBP60983 142 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 PLGLB1Q02325 96 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 ZNF260Q3ZCT1 412 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 PHYHD1Q5SRE7 291 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 BPIFB2Q8N4F0 458 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 OR51S1Q8NGJ8 323 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 OR1F12Q8NHA8 337 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 PSMF1Q92530 271 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 ADGRG7Q96K78 797 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 GAL3ST1Q99999 423 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 TMEM59Q9BXS4 323 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 KCNK15Q9H427 330 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 RGCCQ9H4X1 137 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 DLL4Q9NR61 685 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 TMEM38BQ9NVV0 291 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 MCTS1Q9ULC4 181 aaKnown RBP10.27□□□□□ -0.77
USF1-208ENST00000528768 V9GYS6 101 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 A0A0G2JMM0 328 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 A0A1W2PPB8 328 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 A0A1W2PRS3 328 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 TMEM82A0PJX8 343 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 OR5H15A6NDH6 313 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 OR6C6A6NF89 314 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 ZNF716A6NP11 495 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 KIR3DP1A8MWS1 328 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 RAB27BO00194 218 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 MRPL33O75394 65 aaKnown RBP10.26□□□□□ -0.77
USF1-208ENST00000528768 RGS11O94810 467 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 MPIG6BO95866 241 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 IGLV3-1P01715 115 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 ABOP16442 354 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 ANXA7P20073 488 aaKnown RBP10.26□□□□□ -0.77
USF1-208ENST00000528768 OTX1P32242 354 aaPredicted RBP10.26□□□□□ -0.77
USF1-208ENST00000528768 CASP6P55212 293 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 GFRA1P56159 465 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 CLDN15P56746 228 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 QRFPP83859 136 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 PPA1Q15181 289 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 CNN3Q15417 329 aaKnown RBP10.26□□□□□ -0.77
USF1-208ENST00000528768 OR1C1Q15619 314 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 MPPED2Q15777 294 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 C4orf46Q504U0 113 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 TMEM255AQ5JRV8 349 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 MYO7BQ6PIF6 2116 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 Q6ZSR3 168 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 OR5AS1Q8N127 324 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 C9orf62Q8N4C0 152 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SEMA6DQ8NFY4 1073 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 OR2T35Q8NGX2 323 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 LILRB4Q8NHJ6 448 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 TNFAIP8L1Q8WVP5 186 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 ROBO4Q8WZ75 1007 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SPSB1Q96BD6 273 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 RAB3CQ96E17 227 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 CCDC120Q96HB5 630 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SCGB3A2Q96PL1 93 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 FOXB1Q99853 325 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SPOCK3Q9BQ16 436 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SEC22CQ9BRL7 303 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 PRRG4Q9BZD6 226 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 LINC00470Q9BZP3 86 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 CRLF2Q9HC73 371 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 PCDHB16Q9NRJ7 776 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 PLSCR3Q9NRY6 295 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 SLC2A8Q9NY64 477 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 NOSIPQ9Y314 301 aaKnown RBP10.26□□□□□ -0.77
USF1-208ENST00000528768 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
USF1-208ENST00000528768 MEIS3P1A6NDR6 274 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 TMEM235A6NFC5 223 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 SMLR1H3BR10 107 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 MASP2O00187 686 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CCL21O00585 134 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
USF1-208ENST00000528768 RFPL3SP0C7P2 107 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CD99P14209 185 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CD46P15529 392 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CXCL3P19876 107 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 ALDH3B1P43353 468 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 RBPJQ06330 500 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CLVS2Q5SYC1 327 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 ZNF324BQ6AW86 544 aaPredicted RBP10.25□□□□□ -0.77
USF1-208ENST00000528768 SPINK14Q6IE38 97 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 OR10K2Q6IF99 312 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 LIN54Q6MZP7 749 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 FAAP20Q6NZ36 180 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 SLC16A14Q7RTX9 510 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 SLC36A1Q7Z2H8 476 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 TMEM17Q86X19 198 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 ZDHHC22Q8N966 263 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 GPR137Q96N19 417 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms