RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 INPP5EQ9NRR6 644 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 EXOGQ9Y2C4 368 aaKnown RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 IGHV3OR15-7A0A075B7D8 119 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 IRGMA1A4Y4 181 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 DHRS7CA6NNS2 312 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 SERPINA3P01011 423 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 IGLV3-1P01715 115 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 GYPAP02724 150 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 OCM2P0CE71 109 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-209ENST00000527469 OR12D2P58182 307 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 ELF3P78545 371 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-209ENST00000527469 CDONQ4KMG0 1287 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF691Q5VV52 312 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 LHFPL3Q86UP9 236 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 SCCPDHQ8NBX0 429 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 OR5A2Q8NGI9 324 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 C4orf36Q96KX1 117 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 SLC7A11Q9UPY5 501 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 V9GYS6 101 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
CAPN1-209ENST00000527469 LOC105371242A0A075B767 164 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 A0A1B0GTI1 187 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 ANKRD61A6NGH8 418 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 A6NIN4 97 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 A8MXK9 166 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 J3QRE1 110 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 DLGAP1O14490 977 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 TMPRSS2O15393 492 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 GATBO75879 557 aaKnown RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 CLIC3O95833 236 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 LHBP01229 141 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF20P17024 532 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 NPY4RP50391 375 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 IL18R1Q13478 541 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 MED21Q13503 144 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 GALEQ14376 348 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 OGFRL1Q5TC84 451 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 TMEM244Q5VVB8 128 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 CD276Q5ZPR3 534 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 HAGHLQ6PII5 290 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 C11orf53Q8IXP5 236 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 C8orf59Q8N0T1 100 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 PRSS35Q8N3Z0 413 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF676Q8N7Q3 588 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 OR10Z1Q8NGY1 313 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 OR14K1Q8NGZ2 314 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 OR2G2Q8NGZ5 317 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF671Q8TAW3 534 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 HPSE2Q8WWQ2 592 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 CHCHD3Q9NX63 227 aaKnown RBP11.18□□□□□ -0.62
CAPN1-209ENST00000527469 MYRFQ9Y2G1 1151 aa11.18□□□□□ -0.62
CAPN1-209ENST00000527469 NKX6-3A6NJ46 265 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 KIAA1324LA8MWY0 1029 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 CASQ2O14958 399 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 AKR7A2O43488 359 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 IGHA1P01876 353 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 EGR1P18146 543 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 MYL12AP19105 171 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 CCL1P22362 96 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 CAPGP40121 348 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 GBX2P52951 348 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 TEX36Q5VZQ5 186 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 WDR25Q64LD2 544 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 FAM90A1Q86YD7 464 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 SYS1Q8N2H4 156 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 OR52I1Q8NGK6 324 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 C12orf43Q96C57 262 aaKnown RBP11.17□□□□□ -0.62
CAPN1-209ENST00000527469 TMPRSS13Q9BYE2 586 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 OR51I2Q9H344 312 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
CAPN1-209ENST00000527469 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 FAM230AA0A1W2PPH8 454 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 SRRM5B3KS81 715 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms