RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ZNF331Q9NQX6 463 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-211ENST00000525970 TMEM100Q9NV29 134 aa2.94□□□□□ -1.94
CSDE1-211ENST00000525970 NDRG2Q9UN36 371 aaKnown RBP2.94□□□□□ -1.94
CSDE1-211ENST00000525970 NEU3Q9UQ49 428 aa2.94□□□□□ -1.94
CSDE1-211ENST00000525970 PSG11Q9UQ72 335 aa2.94□□□□□ -1.94
CSDE1-211ENST00000525970 HES2Q9Y543 173 aa2.94□□□□□ -1.94
CSDE1-211ENST00000525970 URGCP-MRPS24S4R325 110 aa2.94□□□□□ -1.94
CSDE1-211ENST00000525970 LRPPRCP42704 1394 aaKnown RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 CCL15-CCL14A0A0B4J2E2 113 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 WI2-2373I1.2A0A1W2PRP0 233 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 RSPH10B2B2RC85 870 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 TRIM49D1C9J1S8 452 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SHOX2O60902 331 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 MMP7P09237 267 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 RSPH10BP0C881 870 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 HSPD1P10809 573 aaKnown RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 ZNF823P16415 610 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 TALDO1P37837 337 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 DSTNP60981 165 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 CDK5Q00535 292 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SYCP1Q15431 976 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 CCL15Q16663 113 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 CDNFQ49AH0 187 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 HSP90B2PQ58FF3 399 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SYT6Q5T7P8 510 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 AHSA2Q719I0 299 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SLC16A13Q7RTY0 426 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SLC34A3Q8N130 599 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 ZCCHC24Q8N2G6 241 aaKnown RBP2.93□□□□□ -1.94
CSDE1-211ENST00000525970 SPICQ8N5J4 248 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 ATPAF2Q8N5M1 289 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 Q8N7P7 452 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 ARIH2OSQ8N7S6 290 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 OR52P1PQ8NH57 321 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 UBA3Q8TBC4 463 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 NT5CQ8TCD5 201 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 ZNF488Q96MN9 340 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 OR4K3Q96R72 315 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 MED10Q9BTT4 135 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 PLEKHF2Q9H8W4 249 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 TMBIM4Q9HC24 238 aa2.93□□□□□ -1.94
CSDE1-211ENST00000525970 IGHV3-72A0A0B4J1Y9 119 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 TMEM213A2RRL7 107 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 M0QXV9 152 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 BPY2O14599 106 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 SERPINB7O75635 380 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 IGLV2-8P01709 118 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 PCK1P35558 622 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 RAP1AP62834 184 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 IFITM3Q01628 133 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 CYP24A1Q07973 514 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 TRDNQ13061 729 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 C16orf72Q14CZ0 275 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 CEACAM16Q2WEN9 425 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 CYP4Z1Q86W10 505 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 MNS1Q8NEH6 495 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 RERGQ96A58 199 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-211ENST00000525970 CATSPER2Q96P56 530 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 GGTLC1Q9BX51 225 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 BEX2Q9BXY8 128 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 WDR55Q9H6Y2 383 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-211ENST00000525970 HMG20AQ9NP66 347 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 SIRT7Q9NRC8 400 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 DDX19AQ9NUU7 478 aaKnown RBP2.92□□□□□ -1.94
CSDE1-211ENST00000525970 OR12D3Q9UGF7 316 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 PPIL1Q9Y3C6 166 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
CSDE1-211ENST00000525970 TRAV19A0A0A6YYK7 116 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 TRAV8-6A0A0B4J262 113 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 KIR2DS1A0A191URI9 304 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 A0A1B0GTI1 187 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 A0A1B0GX12 115 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 ZNF207O43670 478 aaKnown RBP2.91□□□□□ -1.94
CSDE1-211ENST00000525970 PSG2P11465 335 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 SYT1P21579 422 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 MDKP21741 143 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-211ENST00000525970 APLNRP35414 380 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 UGT2B10P36537 528 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 OR10A3P58181 314 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 IL5RAQ01344 420 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 PPIDQ08752 370 aaKnown RBP2.91□□□□□ -1.94
CSDE1-211ENST00000525970 SYCNQ0VAF6 134 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 STX4Q12846 297 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 NAB1Q13506 487 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 BSXQ3C1V8 233 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 MPV17L2Q567V2 206 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 OPN5Q6U736 354 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 RNF175Q8N4F7 328 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 DRAM1Q8N682 238 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 ZNF738Q8NE65 137 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 OR13G1Q8NGZ3 307 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 OR1S1Q8NH92 325 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 COQ8AQ8NI60 647 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 SUN5Q8TC36 379 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 DCAKDQ8WVC6 231 aa2.91□□□□□ -1.94
CSDE1-211ENST00000525970 SRSF12Q8WXF0 261 aaKnown RBP2.91□□□□□ -1.94
CSDE1-211ENST00000525970 ING5Q8WYH8 240 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms