RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 EBPQ15125 230 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 NKAIN1Q4KMZ8 207 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 VAX1Q5SQQ9 334 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 OTPQ5XKR4 325 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 RHBDD2Q6NTF9 364 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 C3orf33Q6P1S2 294 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 C5orf46Q6UWT4 87 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF704Q6ZNC4 412 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 TRAPPC6BQ86SZ2 158 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 WDFY1Q8IWB7 410 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 SVBPQ8N300 66 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ZSCAN4Q8NAM6 433 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ACBD4Q8NC06 268 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ADAD2Q8NCV1 583 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 OR4S1Q8NGB4 309 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 OR13C3Q8NGS6 347 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ASB10Q8WXI3 467 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ARL11Q969Q4 196 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 TMEM230Q96A57 120 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 FER1L6-AS2Q96M78 137 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 C1orf147Q96MC9 270 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 PSMG3-AS1Q96PY0 264 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 PHB2Q99623 299 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 UQCC2Q9BRT2 126 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 MMP26Q9NRE1 261 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 FAM206AQ9NX38 181 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 DHCR7Q9UBM7 475 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 CKLFQ9UBR5 152 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF629Q9UEG4 869 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 OR52A1Q9UKL2 312 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 PTRH2Q9Y3E5 179 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 A0A0A6YYD4 124 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 A6NIZ1 184 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 OR6C76A6NM76 312 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 C17orf51A8MQB3 221 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PRKNO60260 465 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 FADS1O60427 444 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 AGFG2O95081 481 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 OR6A2O95222 327 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SFT2D2O95562 160 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TTRP02766 147 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 FOLR2P14207 255 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 ABOP16442 354 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PGCP20142 388 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 CXCR1P25024 350 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PAX6P26367 422 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PSMB6P28072 239 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SERPINF1P36955 418 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 FOLR3P41439 243 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 DNASE1L1P49184 302 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PRKXP51817 358 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 GPR85P60893 370 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 RAP1BP61224 184 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 RAP1AP62834 184 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 ADAM8P78325 824 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 S100A12P80511 92 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SPOCK1Q08629 439 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TAF13Q15543 124 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PLEKHN1Q494U1 663 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SCGB2B2Q4G0G5 96 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 ACTBL2Q562R1 376 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 DCAF10Q5QP82 559 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 C1orf140Q5VVS0 124 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 OR10K2Q6IF99 312 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TTLL10Q6ZVT0 673 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PGAP1Q75T13 922 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 LHFPL1Q86WI0 220 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TMEM151BQ8IW70 566 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 C9orf40Q8IXQ3 194 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 GVQW1Q8N7I0 195 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 OR4K17Q8NGC6 315 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 OR2Y1Q8NGV0 311 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 THAP6Q8TBB0 222 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 GPR119Q8TDV5 335 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SSC4DQ8WTU2 575 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 RNF138Q8WVD3 245 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 NUDCD2Q8WVJ2 157 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 RNF133Q8WVZ7 376 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TSLPQ969D9 159 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 FOXN4Q96NZ1 517 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 AQP10Q96PS8 301 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 TSNAXQ99598 290 aaKnown RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 PDCD10Q9BUL8 212 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SEC11CQ9BY50 192 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 ESRP2Q9H6T0 727 aaKnown RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 CNTD2Q9H8S5 307 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 CHMP1AQ9HD42 196 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-223ENST00000524033 FANCFQ9NPI8 374 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.87□□□□□ -1.315e-7■■■■■ 41.3
SPIDR-223ENST00000524033 GPR132Q9UNW8 380 aa6.87□□□□□ -1.31
SPIDR-223ENST00000524033 SRPK3Q9UPE1 567 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms