RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MMACHCQ9Y4U1 282 aa4.35□□□□□ -1.71
PABPC1-223ENST00000523636 TIMM10BQ9Y5J6 103 aa4.35□□□□□ -1.71
PABPC1-223ENST00000523636 ARL5AQ9Y689 179 aa4.35□□□□□ -1.71
PABPC1-223ENST00000523636 WNK2Q9Y3S1 2297 aa4.35□□□□□ -1.71
PABPC1-223ENST00000523636 ARFGEF3Q5TH69 2177 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ATP6AP2A0A1C7CYW4 349 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 PRORSD1PA6NEY8 169 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 H3BNH8 94 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 PRMT5O14744 637 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 CHEK1O14757 476 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ACOX3O15254 700 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 PCDH7O60245 1069 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 EEDO75530 441 aaKnown RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 EPPINO95925 133 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 TFAP2AP05549 437 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 HIST1H2AGP0C0S8 130 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 LINC00032P0C843 101 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NR2C1P13056 603 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ICAM2P13598 275 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NPR2P20594 1047 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RPS3P23396 243 aaKnown RBP eCLIP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GLRA1P23415 457 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 PEBP1P30086 187 aaKnown RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 CALCRP30988 508 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 MAGEA5P43359 124 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 P2RY4P51582 365 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF140P52738 457 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NKX2-5P52952 324 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 UBE2V1Q13404 147 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GRB7Q14451 532 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR4D1Q15615 310 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GUK1Q16774 197 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZBED5Q49AG3 693 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GPR33Q49SQ1 333 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ESCO2Q56NI9 601 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ELP2Q6IA86 826 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NIPAL1Q6NVV3 410 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ADAM5Q6NVV9 412 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF549Q6P9A3 640 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 SPESP1Q6UW49 350 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RNF165Q6ZSG1 346 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 FCRLAQ7L513 359 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 LINGO2Q7L985 606 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ERI1Q8IV48 349 aaKnown RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 TMEM251Q8N6I4 163 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF525Q8N782 197 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF441Q8N8Z8 693 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 CDRT4Q8N9R6 151 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 CCDC71LQ8N9Z2 235 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 POC1AQ8NBT0 407 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 INO80EQ8NBZ0 244 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR13C4Q8NGS5 318 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR2L2Q8NH16 312 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR1F12Q8NHA8 337 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 OR10J5Q8NHC4 309 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NANPQ8TBE9 248 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NEK7Q8TDX7 302 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 C10orf105Q8TEF2 133 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NEUROG1Q92886 237 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 LGALS12Q96DT0 336 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RNF170Q96K19 258 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RITA1Q96K30 269 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 C10orf90Q96M02 699 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RDH12Q96NR8 316 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF382Q96SR6 550 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GPR21Q99679 349 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 NDUFAF3Q9BU61 184 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ABHD14AQ9BUJ0 271 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 SEMA6AQ9H2E6 1030 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 MARCH7Q9H992 704 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 SEBOXQ9HB31 216 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 SLC52A3Q9NQ40 469 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 INPP5EQ9NRR6 644 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 AIG1Q9NVV5 245 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GALPQ9UBC7 116 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GNG12Q9UBI6 72 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 ZNF282Q9UDV7 671 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 RSL24D1Q9UHA3 163 aaKnown RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 DIMT1Q9UNQ2 313 aaKnown RBP4.34□□□□□ -1.71
PABPC1-223ENST00000523636 POLDIP2Q9Y2S7 368 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 GMPPBQ9Y5P6 360 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 MMP24Q9Y5R2 645 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 COX11Q9Y6N1 276 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.71
PABPC1-223ENST00000523636 PKD1P98161 4303 aa4.34□□□□□ -1.72
PABPC1-223ENST00000523636 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HEATR5BQ9P2D3 2071 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TRAV24A0A0B4J272 114 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OR51F1A6NGY5 319 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SAGE2PA6NJ88 616 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 LINC01548A6NM66 108 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 J3QR06 171 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PRYO14603 147 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GNGT2O14610 69 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GOSR2O14653 212 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF354AO60765 605 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 FCN3O75636 299 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TRMUO75648 421 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms