RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 F12P00748 615 aaPredicted RBP12.99□□□□□ -0.33
LSM1-203ENST00000520755 NRASP01111 189 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 ADRA2CP18825 462 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
LSM1-203ENST00000520755 GNALP38405 381 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 NCS1P62166 190 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 LSM3P62310 102 aaKnown RBP12.99□□□□□ -0.33
LSM1-203ENST00000520755 CCL8P80075 99 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 PCGF3Q3KNV8 242 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 SPRNQ5BIV9 151 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 WDR86Q86TI4 376 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 LRRTM1Q86UE6 522 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 SERPINA12Q8IW75 414 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 ZDHHC23Q8IYP9 409 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 OR13G1Q8NGZ3 307 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 PHYHIPQ92561 330 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 ELMOD3Q96FG2 381 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 GFI1Q99684 422 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 ZCCHC4Q9H5U6 513 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 DECR2Q9NUI1 292 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 ZDHHC8Q9ULC8 765 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
LSM1-203ENST00000520755 DPPA5A6NC42 116 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 F5H5P2 479 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 SULT1B1O43704 296 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 HPXP02790 462 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 ADH4P08319 380 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 DAOP14920 347 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 ATF1P18846 271 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 THBS2P35442 1172 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 TNFAIP6P98066 277 aaPredicted RBP12.98□□□□□ -0.33
LSM1-203ENST00000520755 CARTPTQ16568 116 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 TIMM50Q3ZCQ8 353 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 HSD17B12Q53GQ0 312 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 FOXB2Q5VYV0 432 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 PLCXD3Q63HM9 321 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 GDPGP1Q6ZNW5 385 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 MOB3CQ70IA8 216 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 FTMTQ8N4E7 242 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 ZNF525Q8N782 197 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 OR1M1Q8NGA1 313 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 OR5P3Q8WZ94 311 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 CXXC4Q9H2H0 198 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 FOXJ3Q9UPW0 622 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
LSM1-203ENST00000520755 PRRC2AP48634 2157 aaKnown RBP12.98□□□□□ -0.33
LSM1-203ENST00000520755 IGKV1-27A0A075B6S5 117 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 ALX3O95076 343 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 TNFSF4P23510 183 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 AZGP1P25311 298 aaKnown RBP12.97□□□□□ -0.33
LSM1-203ENST00000520755 HNRNPA0Q13151 305 aaKnown RBP12.97□□□□□ -0.33
LSM1-203ENST00000520755 OR8G1Q15617 311 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 CLEC12BQ2HXU8 276 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 FAM209AQ5JX71 171 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 NR2C2APQ86WQ0 139 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 TRMT10AQ8TBZ6 339 aaKnown RBP12.97□□□□□ -0.33
LSM1-203ENST00000520755 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
LSM1-203ENST00000520755 EGLN1Q9GZT9 426 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 SAP30LQ9HAJ7 183 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
LSM1-203ENST00000520755 AKAP9Q99996 3911 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 PQLC2LA1A4F0 135 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 CDC14BO60729 498 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 ARL6IP5O75915 188 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 LYNX1P0DP58 116 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 SRMP19623 302 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 RAB3AP20336 220 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 VBP1P61758 197 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 MAB21L1Q13394 359 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 CNN3Q15417 329 aaKnown RBP12.96□□□□□ -0.33
LSM1-203ENST00000520755 CEACAM21Q3KPI0 293 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 SHEQ5VZ18 495 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 CLEC2AQ6UVW9 174 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 OR52N4Q8NGI2 321 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 KCTD7Q96MP8 289 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 SPACA5Q96QH8 159 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 SLC22A4Q9H015 551 aa12.96□□□□□ -0.33
LSM1-203ENST00000520755 CCDC168Q8NDH2 2452 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TRAV1-2A0A0B4J238 106 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 A0A0G2JK05 382 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 IGHV3-64DA0A0J9YX35 117 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 SMIM30A4D0T7 59 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 ANXA2P2A6NMY6 339 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 H3BMQ9 156 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
LSM1-203ENST00000520755 MAS1P04201 325 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 CD55P08174 381 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms