RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DEFB113Q30KQ7 82 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 PLCXD3Q63HM9 321 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 DNM1P46Q6ZS02 220 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 CEACAM19Q7Z692 300 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 LRRTM1Q86UE6 522 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 CDH24Q86UP0 819 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 OR1M1Q8NGA1 313 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 OR5A2Q8NGI9 324 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 OR13C9Q8NGT0 318 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 PP6455Q8WZ26 134 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 RPL3LQ92901 407 aaKnown RBP8.35□□□□□ -1.07
CLN8-202ENST00000517514 DIRC2Q96SL1 478 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 GFI1Q99684 422 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 NKX3-1Q99801 234 aaPredicted RBP8.35□□□□□ -1.07
CLN8-202ENST00000517514 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 NAA50Q9GZZ1 169 aaKnown RBP8.35□□□□□ -1.07
CLN8-202ENST00000517514 SLC22A4Q9H015 551 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 TLNRD1Q9H1K6 362 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 CXXC4Q9H2H0 198 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 OR51I2Q9H344 312 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 ZCCHC4Q9H5U6 513 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 RNF167Q9H6Y7 350 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 GCM1Q9NP62 436 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
CLN8-202ENST00000517514 IL19Q9UHD0 177 aa8.35□□□□□ -1.07
CLN8-202ENST00000517514 ZNF732B4DXR9 585 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 GATBO75879 557 aaKnown RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 F12P00748 615 aaPredicted RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 CD37P11049 281 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 ZNF20P17024 532 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 DNASE1P24855 282 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 AZGP1P25311 298 aaKnown RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 TGFBR1P36897 503 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 GNALP38405 381 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 GATA4P43694 442 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 EFNA4P52798 201 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 TRAM1Q15629 374 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 PCGF3Q3KNV8 242 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 SLC16A12Q6ZSM3 486 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 ZNF826PQ6ZT77 177 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 MOGAT3Q86VF5 341 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 CALHM1Q8IU99 346 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 SERPINA12Q8IW75 414 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 CELF2-AS1Q8N7Q2 184 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 ZNF420Q8TAQ5 688 aaPredicted RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 NPRL2Q8WTW4 380 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 NINJ1Q92982 152 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 PERPQ96FX8 193 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 RNF170Q96K19 258 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 SPACA5Q96QH8 159 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 RAB1BQ9H0U4 201 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 PLEKHA1Q9HB21 404 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 TREM2Q9NZC2 230 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
CLN8-202ENST00000517514 STUB1Q9UNE7 303 aa8.34□□□□□ -1.07
CLN8-202ENST00000517514 YLPM1P49750 1951 aaKnown RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 SULT1B1O43704 296 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 CDC14BO60729 498 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 RHBDL1O75783 438 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 ALDOBP05062 364 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 GRPP07492 148 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 BMP4P12644 408 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 DAOP14920 347 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 EGR1P18146 543 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 GALP22466 123 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 PSMA1P25786 263 aaKnown RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 FGF9P31371 208 aaPredicted RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 ATP5J2P56134 94 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 ZP1P60852 638 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 GNG3P63215 75 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 TESK1Q15569 626 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 FAM201AQ5SY85 155 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 NR2C2APQ86WQ0 139 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 ANGPTL5Q86XS5 388 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 FTMTQ8N4E7 242 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 ZNF525Q8N782 197 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 SPERTQ8NA61 448 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 SCCPDHQ8NBX0 429 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 DNAAF1Q8NEP3 725 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 OR52N4Q8NGI2 321 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 OR5D14Q8NGL3 314 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 OR8S1Q8NH09 359 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 Q8TCH9 128 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 MICU1Q9BPX6 476 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 CENPOQ9BU64 300 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 RTL8AQ9BWD3 113 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 FUNDC2Q9BWH2 189 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 METTL17Q9H7H0 456 aaPredicted RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 SAP30LQ9HAJ7 183 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 ABCB9Q9NP78 766 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 UFSP2Q9NUQ7 469 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 TXNL4BQ9NX01 149 aaKnown RBP8.33□□□□□ -1.08
CLN8-202ENST00000517514 FOXJ3Q9UPW0 622 aa8.33□□□□□ -1.08
CLN8-202ENST00000517514 CR1P17927 2039 aa8.32□□□□□ -1.08
CLN8-202ENST00000517514 ZANQ9Y493 2812 aa8.32□□□□□ -1.08
CLN8-202ENST00000517514 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms