RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SLC25A18Q9H1K4 315 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 C5orf66Q9H5L9 145 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 BEX1Q9HBH7 125 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TUBG2Q9NRH3 451 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TAS2R10Q9NYW0 307 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CACNA1AO00555 2505 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 A0A087WWC5 75 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 A0A1W2PN81 502 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 APOC3P02656 99 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 BGLAPP02818 100 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ANOS1P23352 680 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 SLC6A6P31641 620 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 CHRNA7P36544 502 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF41P51814 821 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 OC90Q02509 493 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 PRSS54Q6PEW0 395 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 OPN5Q6U736 354 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 MOGAT3Q86VF5 341 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ADAD2Q8NCV1 583 aaKnown RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 STEAP2Q8NFT2 490 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 OR8G5Q8NG78 346 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 RNASEH2CQ8TDP1 164 aaKnown RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ST7LQ8TDW4 575 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 GINS3Q9BRX5 216 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 PAPOLGQ9BWT3 736 aaKnown RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 KCNK15Q9H427 330 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 IL17BQ9UHF5 180 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 EP300Q09472 2414 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 PDLIM4P50479 330 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 CLDN12P56749 244 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 RANBP3LQ86VV4 465 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF615Q8N8J6 731 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 LRTM2Q8N967 370 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 OTOSQ8NHW6 89 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF417Q8TAU3 575 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 PLEKHA2Q9HB19 425 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 MRPS7Q9Y2R9 242 aaKnown RBP6.5□□□□□ -1.37
CLIP1-205ENST00000514271 ADAM18Q9Y3Q7 739 aa6.5□□□□□ -1.37
CLIP1-205ENST00000514271 PHYHO14832 338 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 NDUFB2O95178 105 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GYPBP06028 91 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 LIPFP07098 398 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CT45A8P0DMV1 189 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CT45A9P0DMV2 189 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 FAM3AP98173 230 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CT45A2Q5DJT8 189 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 COA6Q5JTJ3 125 aaKnown RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ABHD17BQ5VST6 288 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM225Q6GV28 225 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ETV3LQ6ZN32 361 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 VASH2Q86V25 355 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZADH2Q8N4Q0 377 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 SLC24A4Q8NFF2 622 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 MUCL1Q96DR8 90 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZMYND19Q96E35 227 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 OR8B4Q96RC9 309 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 TBX5Q99593 518 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 WDR77Q9BQA1 342 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CHIAQ9BZP6 476 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RERGLQ9H628 205 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RAB18Q9NP72 206 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 TMED7Q9Y3B3 224 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RIF1Q5UIP0 2472 aaKnown RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF726A6NNF4 738 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GNB5O14775 395 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 STX11O75558 287 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 MT-ND4LP03901 98 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ERVK-25P63136 954 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RAB35Q15286 201 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZNHIT3Q15649 155 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 HLA-DQA1Q5Y7H0 255 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 AWAT2Q6E213 333 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 LCN10Q6JVE6 187 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 HAS2Q92819 552 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GALNT14Q96FL9 552 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 C2orf88Q9BSF0 95 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GGACTQ9BVM4 153 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 DEFB126Q9BYW3 111 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 KRCC1Q9NPI7 259 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 TRIOO75962 3097 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GXYLT2A0PJZ3 443 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CA11O75493 328 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 IGKV3-11P04433 115 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 GNG10P50151 68 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RIDAP52758 137 aaKnown RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 MLF1P58340 268 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 KLRB1Q12918 225 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 DEFB109BQ30KR1 87 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 BAP18Q8IXM2 172 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CDRT4Q8N9R6 151 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 UBAC2Q8NBM4 344 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 THRSPQ92748 146 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 RHOVQ96L33 236 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 CLCC1Q96S66 551 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 NUDT9Q9BW91 350 aa6.49□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF346Q9UL40 294 aaKnown RBP6.49□□□□□ -1.37
CLIP1-205ENST00000514271 MED31Q9Y3C7 131 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms