RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 WNT9BO14905 357 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 EREGO14944 169 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 GMDSO60547 372 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 FBXO24O75426 580 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 PLATP00750 562 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 NRASP01111 189 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ISG15P05161 165 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ATP6V1B1P15313 513 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF20P17024 532 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 EGR1P18146 543 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 CD80P33681 288 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 CD200P41217 278 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 SRP9P49458 86 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 GPM6AP51674 278 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 GMFBP60983 142 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 SPHARQ15513 63 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 TBCEQ15813 527 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 UBE2V2Q15819 145 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 CLVS2Q5SYC1 327 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 RNLSQ5VYX0 342 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 SHEQ5VZ18 495 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ASPHD2Q6ICH7 369 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 Q6ZSR3 168 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 FTMTQ8N4E7 242 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 BOLLQ8N9W6 283 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 OR1M1Q8NGA1 313 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 OR13C9Q8NGT0 318 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 OR5P3Q8WZ94 311 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 GHSRQ92847 366 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 RFT1Q96AA3 541 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 RNF170Q96K19 258 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 OPALINQ96PE5 141 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 MICU1Q9BPX6 476 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 TMED9Q9BVK6 235 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 CHST5Q9GZS9 411 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 METTL17Q9H7H0 456 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 GCM1Q9NP62 436 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 ACOT13Q9NPJ3 140 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 C1orf123Q9NWV4 160 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 TAS2R4Q9NYW5 299 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 PPP1R3CQ9UQK1 317 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 LRCH1Q9Y2L9 728 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 LRRC42Q9Y546 428 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 MPC1Q9Y5U8 109 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 CR1P17927 2039 aa8.27□□□□□ -1.09
TOPBP1-209ENST00000513818 IGHV4-61A0A0C4DH41 118 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 IGKV1-9A0A0C4DH69 117 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ISPDA4D126 451 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 CLDN25C9JDP6 229 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 TNFRSF1AP19438 455 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 CRYBB2P43320 205 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 GPR6P46095 362 aaPredicted RBP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 CHN2P52757 468 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 TAS2R43P59537 309 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 RPS11P62280 158 aaKnown RBP eCLIP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 RPS25P62851 125 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 EMX1Q04741 257 aaPredicted RBP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF154Q13106 437 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 NEDD8Q15843 81 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 HFEQ30201 348 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 KCTD21Q4G0X4 260 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 CCDC58Q4VC31 144 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 LIPKQ5VXJ0 399 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM42Q69YG0 159 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF773Q6PK81 442 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF367Q7RTV3 350 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 RNF144BQ7Z419 303 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 OR51A2Q8NGJ7 313 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 UFD1Q92890 307 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 SPACA5Q96QH8 159 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 OR14A2Q96R54 314 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 PIMREGQ9BSJ6 248 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 SLC22A4Q9H015 551 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 CHODLQ9H9P2 273 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM106BQ9NUM4 274 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF281Q9Y2X9 895 aa8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 NOP16Q9Y3C1 178 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-209ENST00000513818 IGKV1-27A0A075B6S5 117 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 IGHV3OR15-7A0A075B7D8 119 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 LRP5LA4QPB2 252 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 MAGEA13PA6NCF6 341 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 DHRS7CA6NNS2 312 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 CDIPTO14735 213 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 INMTO95050 263 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 RPSAP08865 295 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 CSF3P09919 207 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 OCM2P0CE71 109 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 PCMT1P22061 227 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 AZGP1P25311 298 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 PSMB9P28065 219 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 IL2RGP31785 369 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 NR4A2P43354 598 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms