RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TMEM210A6NLX4 147 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 ZNF732B4DXR9 585 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 E9PQ18 207 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 DVL1O14640 695 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 TMPRSS2O15393 492 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 KRT8P05787 483 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 SELLP14151 372 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 AMY2BP19961 511 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 CPT2P23786 658 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 ATP6V1E1P36543 226 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 FGF12P61328 243 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 ZNF85Q03923 595 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 RIPPLY1Q0D2K3 151 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 TP53I3Q53FA7 332 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 PLCXD3Q63HM9 321 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 ELMOD2Q8IZ81 293 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 ST8SIA4Q92187 359 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 HIST1H2AAQ96QV6 131 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 MOB1AQ9H8S9 216 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 GPR173Q9NS66 373 aa13.68□□□□□ -0.22
DDX41-213ENST00000512027 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 DHRS3O75911 302 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 SFTPBP07988 381 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 OR2T7P0C7T2 308 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 MICBQ29980 383 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 CEACAM21Q3KPI0 293 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 ZNF684Q5T5D7 378 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 CATSPERDQ86XM0 798 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 OR14K1Q8NGZ2 314 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 OR2T27Q8NH04 317 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 RORBQ92753 470 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 UPRTQ96BW1 309 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
DDX41-213ENST00000512027 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 RAB3IPQ96QF0 476 aaPredicted RBP13.67□□□□□ -0.22
DDX41-213ENST00000512027 C9orf16Q9BUW7 83 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 SUCNR1Q9BXA5 334 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 ABCB9Q9NP78 766 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 TRIM36Q9NQ86 728 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 ACOXLQ9NUZ1 547 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.67□□□□□ -0.22
DDX41-213ENST00000512027 ENPP5Q9UJA9 477 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 SNX5Q9Y5X3 404 aa13.67□□□□□ -0.22
DDX41-213ENST00000512027 FBN3Q75N90 2809 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 METTL15A6NJ78 407 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 NDUFA2O43678 99 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 ENSAO43768 121 aaKnown RBP13.66□□□□□ -0.22
DDX41-213ENST00000512027 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 MUC1P15941 1255 aaPredicted RBP13.66□□□□□ -0.22
DDX41-213ENST00000512027 NPY4RP50391 375 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 IKZF1Q13422 519 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 FAM76BQ5HYJ3 339 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 STUMQ69YW2 141 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 BRD3OSQ6XYD6 125 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 KRT74Q7RTS7 529 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 BATF2Q8N1L9 274 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 ZDHHC22Q8N966 263 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 RFKQ969G6 155 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 ZNF488Q96MN9 340 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 PCGF1Q9BSM1 259 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 OR51I2Q9H344 312 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 DNAJB11Q9UBS4 358 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 GMPPBQ9Y5P6 360 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 V9GYS6 101 aa13.66□□□□□ -0.22
DDX41-213ENST00000512027 MDFIC2A0A1B0GVS7 189 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 BAG2O95816 211 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 NRASP01111 189 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 FPR2P25090 351 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 CFHR2P36980 270 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 KIR3DL2P43630 455 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 MTNR1AP48039 350 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.22
DDX41-213ENST00000512027 GNG3P63215 75 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 RUSC1-AS1Q66K80 236 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 HAGHLQ6PII5 290 aaPredicted RBP13.65□□□□□ -0.22
DDX41-213ENST00000512027 ZBTB49Q6ZSB9 765 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 ENTHD1Q8IYW4 607 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 PRSS35Q8N3Z0 413 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 OR10Z1Q8NGY1 313 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 TRUB1Q8WWH5 349 aaKnown RBP13.65□□□□□ -0.22
DDX41-213ENST00000512027 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
DDX41-213ENST00000512027 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
DDX41-213ENST00000512027 KAAG1Q9UBP8 84 aa13.65□□□□□ -0.22
DDX41-213ENST00000512027 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX41-213ENST00000512027 SYNGR1O43759 233 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 MTRF1O75570 445 aaKnown RBP13.64□□□□□ -0.23
DDX41-213ENST00000512027 PLATP00750 562 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 GABRB1P18505 474 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 GLRA1P23415 457 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 ISL1P61371 349 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 TMED1Q13445 227 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 OCLNQ16625 522 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 CLVS2Q5SYC1 327 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 ZBTB37Q5TC79 503 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms