RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	OPRL1	P41146	370 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	AQP2	P41181	271 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	CSNK1A1	P48729	337 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	DAP3	P51398	398 aa	Known RBP	4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	ZNF83	P51522	516 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	IST1	P53990	364 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	PRPS1	P60891	318 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	SPIB	Q01892	262 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	PRKCD	Q05655	676 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	ZP4	Q12836	540 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	DGCR6	Q14129	220 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	OPCML	Q14982	345 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	CEACAM16	Q2WEN9	425 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	DNAL1	Q4LDG9	190 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	LBH	Q53QV2	105 aa	Predicted RBP	4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	LCN8	Q6JVE9	175 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	TBPL2	Q6SJ96	375 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	NHLRC1	Q6VVB1	395 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	MBOAT2	Q6ZWT7	520 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	HDDC2	Q7Z4H3	204 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	NRARP	Q7Z6K4	114 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	DHFR2	Q86XF0	187 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	WDR31	Q8NA23	367 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	NOXO1	Q8NFA2	376 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	OR13C2	Q8NGS9	318 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	OR6N1	Q8NGY5	312 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	OR52J3	Q8NH60	311 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	OR6X1	Q8NH79	312 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	SLC7A13	Q8TCU3	470 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	LIPH	Q8WWY8	451 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	ASB9	Q96DX5	294 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	ZNF486	Q96H40	463 aa	Predicted RBP	4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	PYURF	Q96I23	114 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	C7orf34	Q96L11	122 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	TSPAN32	Q96QS1	320 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	CCL19	Q99731	98 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	ULBP2	Q9BZM5	246 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	C1orf21	Q9H246	121 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	CRLF2	Q9HC73	371 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	B3GAT2	Q9NPZ5	323 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	SLC17A5	Q9NRA2	495 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	INIP	Q9NRY2	104 aa		4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	FAM32A	Q9Y421	112 aa	Known RBP	4.35	□□□□□ -1.71
MATR3-218	ENST00000511978	FREM1	Q5H8C1	2179 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ABCA12	Q86UK0	2595 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	MAST4	O15021	2626 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ITPR2	Q14571	2701 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978		A0A087WUU8	490 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	TRBV4-1	A0A0J9YWV2	114 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978		A0A1W2PPW3	197 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ZNF99	A8MXY4	864 aa	Predicted RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	SHISA9	B4DS77	424 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ATP6V1G2-DDX39B	F2Z307	99 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	CDC42EP2	O14613	210 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	GYG2	O15488	501 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	NXPH2	O95156	264 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	GADD45G	O95257	159 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	DUS4L	O95620	317 aa	Known RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	STAMBP	O95630	424 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	IGHG1	P01857	330 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	IGHM	P01871	453 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	TSPAN19	P0C672	248 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	PGA4	P0DJD7	388 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	PGA3	P0DJD8	388 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ADRA2C	P18825	462 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	RRM2	P31350	389 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	MAGEA2	P43356	314 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	OMP	P47874	163 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	UBE2N	P61088	152 aa	Known RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ACKR1	Q16570	336 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	DEFB113	Q30KQ7	82 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	IQCC	Q4KMZ1	466 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	C1QTNF12	Q5T7M4	302 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	PODNL1	Q6PEZ8	512 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	OAF	Q86UD1	273 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ZDHHC21	Q8IVQ6	265 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	FAM89B	Q8N5H3	189 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	LRRC75A	Q8NAA5	344 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	OR4K5	Q8NGD3	323 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	OR51A7	Q8NH64	312 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	FANK1	Q8TC84	345 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	BCL2L2	Q92843	193 aa	Predicted RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	TMEM54	Q969K7	222 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	SLC25A44	Q96H78	314 aa	Predicted RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	FOXC2	Q99958	501 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	THTPA	Q9BU02	230 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	C1QTNF6	Q9BXI9	259 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	TRIM15	Q9C019	465 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	NDEL1	Q9GZM8	345 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	TAS2R1	Q9NYW7	299 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	GLTP	Q9NZD2	209 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	ACTR3B	Q9P1U1	418 aa		4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	STX18	Q9P2W9	335 aa	Known RBP	4.34	□□□□□ -1.71
MATR3-218	ENST00000511978	LRBA	P50851	2863 aa		4.34	□□□□□ -1.72
MATR3-218	ENST00000511978	NBPF19	A0A087WUL8	3843 aa		4.34	□□□□□ -1.72
MATR3-218	ENST00000511978	ANKRD17	O75179	2603 aa	Known RBP	4.33	□□□□□ -1.72
MATR3-218	ENST00000511978	CACNA1D	Q01668	2161 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms