RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 RPUSD1Q9UJJ7 312 aaKnown RBP19■□□□□ 0.63
SNF8-209ENST00000510558 IGLV3-1P01715 115 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 ATP6V1B1P15313 513 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 AMY2BP19961 511 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 GPM6AP51674 278 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 CXCR4P61073 352 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 MFGE8Q08431 387 aaPredicted RBP18.99■□□□□ 0.63
SNF8-209ENST00000510558 FOXL1Q12952 345 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 ZNF322Q6U7Q0 402 aaPredicted RBP18.99■□□□□ 0.63
SNF8-209ENST00000510558 OR5T2Q8NGG2 359 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 FAM71F1Q96KD3 344 aaPredicted RBP18.99■□□□□ 0.63
SNF8-209ENST00000510558 MNTQ99583 582 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 CIB1Q99828 191 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 GPR84Q9NQS5 396 aa18.99■□□□□ 0.63
SNF8-209ENST00000510558 AKR7A2O43488 359 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 ARF6P62330 175 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 CEP78Q5JTW2 689 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 THAP5Q7Z6K1 395 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 GID4Q8IVV7 300 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 ZDHHC16Q969W1 377 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 PPP1R14AQ96A00 147 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 RAB3IPQ96QF0 476 aaPredicted RBP18.98■□□□□ 0.63
SNF8-209ENST00000510558 APOL4Q9BPW4 351 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 SEMA6AQ9H2E6 1030 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 PRDM13Q9H4Q3 707 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 SNTG1Q9NSN8 517 aa18.98■□□□□ 0.63
SNF8-209ENST00000510558 CENPVL3A0A0U1RRI6 287 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 ZNF670-ZNF695F2Z2N8 137 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 NDUFB3O43676 98 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 SRSF10O75494 262 aaKnown RBP18.97■□□□□ 0.63
SNF8-209ENST00000510558 CIB2O75838 187 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 TTRP02766 147 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 TGM4P49221 684 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 GNG3P63215 75 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 RIPPLY1Q0D2K3 151 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 IKZF1Q13422 519 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 PDCD1Q15116 288 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 CEACAM21Q3KPI0 293 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 ATPAF1Q5TC12 328 aaPredicted RBP18.97■□□□□ 0.63
SNF8-209ENST00000510558 GATAD2BQ8WXI9 593 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 CENPNQ96H22 339 aaPredicted RBP18.97■□□□□ 0.63
SNF8-209ENST00000510558 DNTTIP1Q9H147 329 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 CNTD2Q9H8S5 307 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 CLN6Q9NWW5 311 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 GTF2A1LQ9UNN4 478 aa18.97■□□□□ 0.63
SNF8-209ENST00000510558 NKX6-3A6NJ46 265 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 ZNF732B4DXR9 585 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 LOC110117498-PIK3R3F6TDL0 507 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 MAGEB4O15481 346 aaPredicted RBP18.96■□□□□ 0.63
SNF8-209ENST00000510558 HOXA3O43365 443 aaPredicted RBP18.96■□□□□ 0.63
SNF8-209ENST00000510558 SELLP14151 372 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 FAHP16930 419 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 POLR2IP36954 125 aaKnown RBP18.96■□□□□ 0.63
SNF8-209ENST00000510558 ACTR3P61158 418 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 LRRC10Q5BKY1 277 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 DMRTC1Q5HYR2 192 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 ZBTB37Q5TC79 503 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 LHX4Q969G2 390 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 OR51I2Q9H344 312 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 MOB1AQ9H8S9 216 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 OAZ3Q9UMX2 235 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 PIGLQ9Y2B2 252 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 KPTNQ9Y664 436 aa18.96■□□□□ 0.63
SNF8-209ENST00000510558 OR5B21A6NL26 309 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 GPR37O15354 613 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 RHBDL1O75783 438 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 DHRS3O75911 302 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 EGR3Q06889 387 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 PLCXD3Q63HM9 321 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 ZNF788Q6ZQV5 615 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 PLEKHG7Q6ZR37 379 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 MOB3CQ70IA8 216 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 LY6G5BQ8NDX9 201 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 OR5A2Q8NGI9 324 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 OR51G2Q8NGK0 314 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 ANGPTL6Q8NI99 470 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 GABARAPL3Q9BY60 117 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 NOX4Q9NPH5 578 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 WARS2Q9UGM6 360 aaKnown RBP18.95■□□□□ 0.62
SNF8-209ENST00000510558 MRM2Q9UI43 246 aaKnown RBP18.95■□□□□ 0.62
SNF8-209ENST00000510558 ENPP5Q9UJA9 477 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 PCDHGB1Q9Y5G3 927 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 R4GMQ9 66 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 NBEAL1Q6ZS30 2694 aa18.95■□□□□ 0.62
SNF8-209ENST00000510558 IGHV1-69DA0A0B4J2H0 117 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 SAC3D1A6NKF1 404 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 MTRF1O75570 445 aaKnown RBP18.94■□□□□ 0.62
SNF8-209ENST00000510558 IGHV1-69P01742 117 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 TFF1P04155 84 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 GLRA1P23415 457 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 CDONQ4KMG0 1287 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 BCL2L15Q5TBC7 163 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 C16orf87Q6PH81 154 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 Q6YL49 198 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 GAFA1Q96PS6 74 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 DCTN5Q9BTE1 182 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 RIBC2Q9H4K1 309 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 ACOXLQ9NUZ1 547 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 ONECUT1Q9UBC0 465 aa18.94■□□□□ 0.62
SNF8-209ENST00000510558 NLKQ9UBE8 527 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms