RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	OR8S1	Q8NH09	359 aa		7.4	□□□□□ -1.22
PTPN20-223	ENST00000509900	RNF141	Q8WVD5	230 aa		7.4	□□□□□ -1.22
PTPN20-223	ENST00000509900	TBC1D23	Q9NUY8	699 aa		7.4	□□□□□ -1.22
PTPN20-223	ENST00000509900	NLK	Q9UBE8	527 aa		7.4	□□□□□ -1.22
PTPN20-223	ENST00000509900	COA3	Q9Y2R0	106 aa	Predicted RBP	7.4	□□□□□ -1.22
PTPN20-223	ENST00000509900	SERPINE3	A8MV23	424 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900		M0QZK8	103 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	CLIC1	O00299	241 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	COPE	O14579	308 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	SAP30	O75446	220 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	PSG2	P11465	335 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	MDH1	P40925	334 aa	Known RBP	7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	CAPZA1	P52907	286 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	GNG11	P61952	73 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	CDK6	Q00534	326 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	TRAP1	Q12931	704 aa	Known RBP	7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	MEP1B	Q16820	701 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	DUSP7	Q16829	419 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	GLYATL3	Q5SZD4	288 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	LGALS9C	Q6DKI2	356 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	TEX38	Q6PEX7	206 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	TMPRSS11F	Q6ZWK6	438 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	NKAIN4	Q8IVV8	208 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	SGPP2	Q8IWX5	399 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	STPG2	Q8N412	459 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR10Z1	Q8NGY1	313 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	NDNF	Q8TB73	568 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	TMEM255B	Q8WV15	326 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	C4orf3	Q8WVX3	66 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	FMO2	Q99518	471 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	PITX2	Q99697	317 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	AIG1	Q9NVV5	245 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	HHLA2	Q9UM44	414 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	POLR1D	Q9Y2S0	133 aa		7.39	□□□□□ -1.23
PTPN20-223	ENST00000509900	NUPR2	A6NF83	97 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	IMPA2	O14732	288 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	TIPRL	O75663	272 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR5F1	O95221	314 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	HOXB9	P17482	250 aa	Predicted RBP	7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	LBP	P18428	481 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	FHL1	Q13642	323 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	PMS2P11	Q13670	270 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	SNAPC1	Q16533	368 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	MEST	Q5EB52	335 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	GCNT6	Q5T4J0	391 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	LCN8	Q6JVE9	175 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	C8orf74	Q6P047	294 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	TSEN54	Q7Z6J9	526 aa	Known RBP	7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	CALHM1	Q8IU99	346 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	C4orf33	Q8N1A6	199 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	RNF152	Q8N8N0	203 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR6Q1	Q8NGQ2	317 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR2T27	Q8NH04	317 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	RPL3L	Q92901	407 aa	Known RBP	7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	STMN2	Q93045	179 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	SDSL	Q96GA7	329 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	TSPYL1	Q9H0U9	437 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	RERGL	Q9H628	205 aa		7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	PNRC2	Q9NPJ4	139 aa	Known RBP	7.38	□□□□□ -1.23
PTPN20-223	ENST00000509900	MEX3A	A1L020	520 aa	Known RBP	7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	PRSS37	A4D1T9	235 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	CXorf65	A6NEN9	183 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	LINC01548	A6NM66	108 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	PSPN	O60542	156 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	SLC16A7	O60669	478 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	PTP4A3	O75365	173 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	SERPINB7	O75635	380 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	BRS3	P32247	399 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	RBM34	P42696	430 aa	Known RBP	7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	ACTA2	P62736	377 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	ACTG2	P63267	376 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	ACTC1	P68032	377 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	ACTA1	P68133	377 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	IL18R1	Q13478	541 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	SCARB2	Q14108	478 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	CXorf66	Q5JRM2	361 aa	Predicted RBP	7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	C6orf10	Q5SRN2	563 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	OR4P4	Q8NGL7	312 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	DCUN1D4	Q92564	292 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900		Q96M85	177 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	PAIP1	Q9H074	479 aa	Known RBP	7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	SYT4	Q9H2B2	425 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	YY1AP1	Q9H869	796 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	SP140L	Q9H930	580 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	MOB4	Q9Y3A3	225 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	ADAM18	Q9Y3Q7	739 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	HSPE1-MOB4	S4R3N1	261 aa		7.37	□□□□□ -1.23
PTPN20-223	ENST00000509900	TRAV27	A0A087WT01	109 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	IGHV2-26	A0A0B4J1V2	119 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	SHISA3	A0PJX4	238 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	MAGEA13P	A6NCF6	341 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ANKRD30BL	A7E2S9	258 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	C12orf77	C9JDV5	145 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900		M0R135	149 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	OVOL1	O14753	267 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ZSCAN12	O43309	604 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	RIPK2	O43353	540 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	ITM2A	O43736	263 aa		7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	KHDRBS3	O75525	346 aa	Known RBP	7.36	□□□□□ -1.23
PTPN20-223	ENST00000509900	BPNT1	O95861	308 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms