RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NXNL2Q5VZ03 156 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 DEGS2Q6QHC5 323 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 MOB3CQ70IA8 216 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 THAP5Q7Z6K1 395 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 PDZD9Q8IXQ8 264 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 PNLDC1Q8NA58 520 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 DUS3LQ96G46 650 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 WDFY2Q96P53 400 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 TBX15Q96SF7 602 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 TLNRD1Q9H1K6 362 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 ZNF391Q9UJN7 358 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 PIGLQ9Y2B2 252 aa12.26□□□□□ -0.45
UBE2D3-228ENST00000508974 A0A0U1RQV5 110 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 A6NIN4 97 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 TMEM210A6NLX4 147 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 SRRM5B3KS81 715 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ZNF670-ZNF695F2Z2N8 137 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 LOC110117498-PIK3R3F6TDL0 507 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 H3BSH0 61 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ZNF254O75437 659 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 RHBDL1O75783 438 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 RPP14O95059 124 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 TTRP02766 147 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 EFNB1P98172 346 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 PRB3Q04118 309 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 SLC9A3R2Q15599 337 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ODF4Q2M2E3 257 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 DEFB112Q30KQ8 113 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 AWAT1Q58HT5 328 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 BCL2L15Q5TBC7 163 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 PLCXD3Q63HM9 321 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 SSX6Q7RTT6 188 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 H1FXQ92522 213 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 LHX4Q969G2 390 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ABCB9Q9NP78 766 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 HAO2Q9NYQ3 351 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 NUFIP1Q9UHK0 495 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-228ENST00000508974 NBEAL1Q6ZS30 2694 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 NKX6-3A6NJ46 265 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 P2RY10O00398 339 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 NDUFB3O43676 98 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 MMP9P14780 707 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 AMY2BP19961 511 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 COMPP49747 757 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 RIPPLY1Q0D2K3 151 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 STUMQ69YW2 141 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 C9orf139Q6ZV77 190 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 SLC36A1Q7Z2H8 476 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 SLC25A28Q96A46 364 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 CENPNQ96H22 339 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 SIRPDQ9H106 197 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 GPR173Q9NS66 373 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 CLN6Q9NWW5 311 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 ENOPH1Q9UHY7 261 aa12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 MRM2Q9UI43 246 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 RPUSD1Q9UJJ7 312 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-228ENST00000508974 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 ACOD1A6NK06 481 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 SRSF10O75494 262 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 LIPFP07098 398 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 GLRA1P23415 457 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 DCTDP32321 178 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 GABRA2P47869 451 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 DLX1P56177 255 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 GNG3P63215 75 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 KPNB1Q14974 876 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 CEACAM21Q3KPI0 293 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 HAGHLQ6PII5 290 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 ASRGL1Q7L266 308 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 VMO1Q7Z5L0 202 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 BATF2Q8N1L9 274 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 YIPF7Q8N8F6 280 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 OR10Z1Q8NGY1 313 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 GAFA1Q96PS6 74 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 RAB3IPQ96QF0 476 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 GABARAPL3Q9BY60 117 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 OR51I2Q9H344 312 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 ENPP5Q9UJA9 477 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 OR52A1Q9UKL2 312 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 SLC22A13Q9Y226 551 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 PCDHGB1Q9Y5G3 927 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 R4GMQ9 66 aa12.23□□□□□ -0.45
UBE2D3-228ENST00000508974 DHRS3O75911 302 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 ECDO95905 644 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 IGLV3-1P01715 115 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 RNASE1P07998 156 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 HKR1P10072 659 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 ACTR3P61158 418 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 ZNF684Q5T5D7 378 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 OR10H4Q8NGA5 316 aa12.22□□□□□ -0.45
UBE2D3-228ENST00000508974 GATAD2BQ8WXI9 593 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms