RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LIN7CQ9NUP9 197 aaKnown RBP4□□□□□ -1.77
PDLIM5-211ENST00000508531 KLHL28Q9NXS3 571 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC2A8Q9NY64 477 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 MARCH4Q9P2E8 410 aaPredicted RBP4□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC13A4Q9UKG4 626 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 FBXW2Q9UKT8 454 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 YARS2Q9Y2Z4 477 aaKnown RBP4□□□□□ -1.77
PDLIM5-211ENST00000508531 NOP16Q9Y3C1 178 aaKnown RBP4□□□□□ -1.77
PDLIM5-211ENST00000508531 PPIL1Q9Y3C6 166 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 PCDHGA5Q9Y5G8 931 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 ANK1P16157 1881 aa4□□□□□ -1.77
PDLIM5-211ENST00000508531 PTPRSQ13332 1948 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 RALGAPA2Q2PPJ7 1873 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 IGKV6-21A0A0C4DH24 114 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 KIR2DL5BA0A0G2JN68 375 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 KIR2DL5BA0A0G2JPC4 375 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TRBV4-1A0A0J9YWV2 114 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TRBV11-1A0A0K0K1C0 115 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 hCG_1809904A0A1W2PP81 198 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 A0A1W2PPE3 182 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 A0A1W2PR64 198 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 A0A1W2PRV1 198 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SMIM30A4D0T7 59 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TMEM150BA6NC51 233 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A18PA6NE21 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A16PA6NEW6 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 OR6C76A6NM76 312 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A9PA6NNJ1 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A5PA8MXJ8 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 B4E171 279 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 BUB3O43684 328 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 OR1F1O43749 312 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 DOK2O60496 412 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SRPX2O60687 465 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BKO60814 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 GLSO94925 669 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 NXPH2O95156 264 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SOX14O95416 240 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SYNGR4O95473 234 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 DUS4LO95620 317 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 CYB5AP00167 134 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 PDYNP01213 254 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HLA-AP01891 365 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 PMP2P02689 132 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 IFNA6P05013 189 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BJP06899 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 UMODP07911 640 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 MMP3P08254 477 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ADRA2AP08913 450 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A15PP0C7V4 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SEC11BP0C7V7 166 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM90A14PP0C7W9 464 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM157CP0CG43 387 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 CT45A8P0DMV1 189 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 CT45A9P0DMV2 189 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 LYL1P12980 280 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ATF1P18846 271 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 NT5EP21589 574 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BOP23527 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ADORA2BP29275 332 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SHC1P29353 583 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 AQP1P29972 269 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BBP33778 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 PRSS3P35030 304 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 GABRA4P48169 554 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 AKR1C2P52895 323 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 MVDP53602 400 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BDP58876 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TAS2R20P59543 309 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H2BCP62807 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 RBX1P62877 108 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST1H3AP68431 136 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 SLC35A1P78382 337 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ARF5P84085 180 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 RPL19P84098 196 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 CDK3Q00526 305 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HMGCS1Q01581 520 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 POU3F1Q03052 451 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 AKR1C1Q04828 323 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ST3GAL3Q11203 375 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 RUNX2Q13950 521 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TAF9Q16594 264 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 DECR1Q16698 335 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST2H2BEQ16778 126 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TMEM183BQ1AE95 376 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 PGGHGQ32M88 737 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 CT45A2Q5DJT8 189 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 DMKNQ6E0U4 476 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 WBP2NLQ6ICG8 309 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 OR8G2PQ6IF36 304 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 FAM71E1Q6IPT2 247 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ZNF774Q6NX45 483 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 STEAP1BQ6NZ63 245 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 TNFAIP8L2Q6P589 184 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 PRSS54Q6PEW0 395 aa3.99□□□□□ -1.77
PDLIM5-211ENST00000508531 ARL9Q6T311 187 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms