RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TIMD4Q96H15 378 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 CHODLQ9H9P2 273 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 NDUFB11Q9NX14 153 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 FOXJ3Q9UPW0 622 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 HRNRQ86YZ3 2850 aaPredicted RBP17.02■□□□□ 0.31
USP53-203ENST00000507597 LRP5LA4QPB2 252 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 MEGF11A6BM72 1044 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 ZNF732B4DXR9 585 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 SULT1B1O43704 296 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 INMTO95050 263 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 PTBP3O95758 552 aaKnown RBP17.01■□□□□ 0.31
USP53-203ENST00000507597 CYB5AP00167 134 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 TGFBR2P37173 567 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 GPM6AP51674 278 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 MAB21L1Q13394 359 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 DOC2BQ14184 412 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 ZNF181Q2M3W8 571 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 FAM76BQ5HYJ3 339 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 CEACAM19Q7Z692 300 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 OR1M1Q8NGA1 313 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 RGP1Q92546 391 aaPredicted RBP17.01■□□□□ 0.31
USP53-203ENST00000507597 CCL17Q92583 94 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 MUL1Q969V5 352 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 OR14A2Q96R54 314 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 TCF7L1Q9HCS4 588 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 GSTK1Q9Y2Q3 226 aa17.01■□□□□ 0.31
USP53-203ENST00000507597 FAM230AA0A1W2PPH8 454 aa17■□□□□ 0.31
USP53-203ENST00000507597 CLDN25C9JDP6 229 aa17■□□□□ 0.31
USP53-203ENST00000507597 GPX5O75715 221 aa17■□□□□ 0.31
USP53-203ENST00000507597 HCKP08631 526 aa17■□□□□ 0.31
USP53-203ENST00000507597 ART1P52961 327 aa17■□□□□ 0.31
USP53-203ENST00000507597 RPS11P62280 158 aaKnown RBP eCLIP17■□□□□ 0.31
USP53-203ENST00000507597 UBE2V2Q15819 145 aa17■□□□□ 0.31
USP53-203ENST00000507597 CARTPTQ16568 116 aa17■□□□□ 0.31
USP53-203ENST00000507597 UNQ9370/PRO34162Q6UXP9 181 aa17■□□□□ 0.31
USP53-203ENST00000507597 OR13C9Q8NGT0 318 aa17■□□□□ 0.31
USP53-203ENST00000507597 Q8TCH9 128 aa17■□□□□ 0.31
USP53-203ENST00000507597 FAM168AQ92567 244 aa17■□□□□ 0.31
USP53-203ENST00000507597 TMEM203Q969S6 136 aa17■□□□□ 0.31
USP53-203ENST00000507597 GCM1Q9NP62 436 aa17■□□□□ 0.31
USP53-203ENST00000507597 TMEM138Q9NPI0 162 aa17■□□□□ 0.31
USP53-203ENST00000507597 SCOCQ9UIL1 159 aa17■□□□□ 0.31
USP53-203ENST00000507597 SSR3Q9UNL2 185 aa17■□□□□ 0.31
USP53-203ENST00000507597 POLDIP2Q9Y2S7 368 aa17■□□□□ 0.31
USP53-203ENST00000507597 ARFGEF3Q5TH69 2177 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 TRBV5-7A0A0A0MS05 114 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 LMX1BO60663 402 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 CDC14BO60729 498 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 NDUFS7O75251 213 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 NCR1O76036 304 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 ALDOBP05062 364 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 FSTP19883 344 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 AZGP1P25311 298 aaKnown RBP16.99■□□□□ 0.31
USP53-203ENST00000507597 HSD17B12Q53GQ0 312 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 MOGAT3Q86VF5 341 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 OR13C5Q8NGS8 318 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 RAB1CQ92928 201 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
USP53-203ENST00000507597 DERL3Q96Q80 235 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 PIMREGQ9BSJ6 248 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 NOX4Q9NPH5 578 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 TMEM106BQ9NUM4 274 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 RNF7Q9UBF6 113 aa16.99■□□□□ 0.31
USP53-203ENST00000507597 SF3B6Q9Y3B4 125 aaKnown RBP16.99■□□□□ 0.31
USP53-203ENST00000507597 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 hCG_1807616A0A1W2PRN6 198 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 TRIM64BA6NI03 449 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 BDKRB2P30411 391 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 MTCP1P56278 107 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 RPS25P62851 125 aaKnown RBP16.98■□□□□ 0.31
USP53-203ENST00000507597 ZNF154Q13106 437 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 KCNJ8Q15842 424 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 CLEC12BQ2HXU8 276 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 CDH26Q8IXH8 852 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 PNLDC1Q8NA58 520 aaKnown RBP16.98■□□□□ 0.31
USP53-203ENST00000507597 OR10Z1Q8NGY1 313 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 TLNRD1Q9H1K6 362 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 UFSP2Q9NUQ7 469 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 STUB1Q9UNE7 303 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 LRBAP50851 2863 aa16.98■□□□□ 0.31
USP53-203ENST00000507597 APCP25054 2843 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 TRDV1A0A1B0GX56 115 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 PQLC2LA1A4F0 135 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 GABRPO00591 440 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 SC5DO75845 299 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 SLC25A16P16260 332 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 CD36P16671 472 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 COL8A2P25067 703 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 THBS2P35442 1172 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 GPR6P46095 362 aaPredicted RBP16.97■□□□□ 0.31
USP53-203ENST00000507597 HAAOP46952 286 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 PSMD7P51665 324 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 SSX1Q16384 188 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 Q5PR19 223 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 PRAMEF6Q5VXH4 476 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 GDPGP1Q6ZNW5 385 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 MKXQ8IYA7 352 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 NKAIN3Q8N8D7 197 aa16.97■□□□□ 0.31
USP53-203ENST00000507597 TRMT10AQ8TBZ6 339 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms