RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LOC100289279A0A1B0GTE1 492 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SMIM31A0A1B0GVY4 71 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 FAM230AA0A1W2PPH8 454 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SMIM30A4D0T7 59 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 CCDC160A6NGH7 325 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 H3BMQ9 156 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 CDRT1O95170 752 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 ADH4P08319 380 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 HCKP08631 526 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SSTR2P30874 369 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SDC2P34741 201 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SERPINB10P48595 397 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 MTNR1BP49286 362 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 PPOXP50336 477 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 GPM6AP51674 278 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 OR10A3P58181 314 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 MAB21L1Q13394 359 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SPCS2Q15005 226 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 DDI2Q5TDH0 399 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 C20orf204Q6ZNR8 217 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 NR2C2APQ86WQ0 139 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 NDNFQ8TB73 568 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 IGFBPL1Q8WX77 278 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 NRGNQ92686 78 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 RNF170Q96K19 258 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 TECTBQ96PL2 329 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 BCL7BQ9BQE9 202 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 RTL8AQ9BWD3 113 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 LIME1Q9H400 295 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 ABCB9Q9NP78 766 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 TMEM138Q9NPI0 162 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
RNF4-208ENST00000507247 TANC2Q9HCD6 1990 aa12.04□□□□□ -0.48
RNF4-208ENST00000507247 A0A0G2JK05 382 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.03□□□□□ -0.48
RNF4-208ENST00000507247 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 ZNF732B4DXR9 585 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 NCR1O76036 304 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 ALDOBP05062 364 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 PRKACBP22694 351 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 CD200P41217 278 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 FUT6P51993 359 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 CAV3P56539 151 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 TNFAIP6P98066 277 aaPredicted RBP12.03□□□□□ -0.48
RNF4-208ENST00000507247 MXD1Q05195 221 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 LYPD6Q86Y78 171 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 ITLN1Q8WWA0 313 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 RFT1Q96AA3 541 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 BORCS8Q96FH0 119 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 HIST1H2AAQ96QV6 131 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 MICU1Q9BPX6 476 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 CACNG6Q9BXT2 260 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 MS4A5Q9H3V2 200 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 NDUFA13Q9P0J0 144 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 RSL24D1Q9UHA3 163 aaKnown RBP12.03□□□□□ -0.48
RNF4-208ENST00000507247 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
RNF4-208ENST00000507247 NOP16Q9Y3C1 178 aaKnown RBP12.03□□□□□ -0.48
RNF4-208ENST00000507247 OR5B21A6NL26 309 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 CD55P08174 381 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 OCMP0CE72 109 aaPredicted RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 RAB3BP20337 219 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 CDKN1AP38936 164 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 GNG3P63215 75 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 CCL8P80075 99 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 ZNF154Q13106 437 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 KISS1Q15726 138 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 LHFPL2Q6ZUX7 228 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 TPRA1Q86W33 373 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 CALHM1Q8IU99 346 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 SPERTQ8NA61 448 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 DIRC2Q96SL1 478 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
RNF4-208ENST00000507247 DCSTAMPQ9H295 470 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 OR51I2Q9H344 312 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 DYSFO75923 2080 aa12.02□□□□□ -0.49
RNF4-208ENST00000507247 MEGF11A6BM72 1044 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 TMEM210A6NLX4 147 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
RNF4-208ENST00000507247 OVOL3O00110 214 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 PDCD5O14737 125 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 SLC22A1O15245 554 aa12.01□□□□□ -0.49
RNF4-208ENST00000507247 PTBP3O95758 552 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms