RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PLCXD2Q0VAA5 305 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 FUT5Q11128 374 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 GANABQ14697 944 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 MAD2L1BPQ15013 274 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 NCF4Q15080 339 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 EBPQ15125 230 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR1Q1Q15612 314 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ISXQ2M1V0 245 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TIMM50Q3ZCQ8 353 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZBED5Q49AG3 693 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 UTF1Q5T230 341 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 PDZK1Q5T2W1 519 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 MRPL2Q5T653 305 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 SLX4IPQ5VYV7 408 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TBPL2Q6SJ96 375 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OPN5Q6U736 354 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM205Q6UW68 189 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 RASSF6Q6ZTQ3 369 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 NDUFAF7Q7L592 441 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 PRSS48Q7RTY5 328 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 GRINAQ7Z429 371 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD37Q7Z713 158 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 GALNT10Q86SR1 603 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OAFQ86UD1 273 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 VRK2Q86Y07 508 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB43Q86YS6 212 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 EGFL6Q8IUX8 553 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 GID4Q8IVV7 300 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 STX19Q8N4C7 294 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 BCORP1Q8N888 145 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF540Q8NDQ6 660 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 KLHL30-AS1Q8NEE0 82 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 NFAM1Q8NET5 270 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 BPIFB6Q8NFQ5 453 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR2T33Q8NG76 320 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR52L1Q8NGH7 329 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR9Q1Q8NGQ5 310 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR2Y1Q8NGV0 311 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5W2Q8NH69 310 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 RHOXF1Q8NHV9 184 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 WDR36Q8NI36 951 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF563Q8TA94 476 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM81AQ8TBF8 368 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 M1APQ8TC57 530 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC7A13Q8TCU3 470 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 HAVCR2Q8TDQ0 301 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF721Q8TF20 911 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM239Q8WW34 195 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 RORBQ92753 470 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ADIPOR1Q96A54 375 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 KIAA1143Q96AT1 154 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 MBOAT4Q96T53 435 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 PITX2Q99697 317 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ARHGDIGQ99819 225 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 BCL7BQ9BQE9 202 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM43Q9BTV4 400 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 EDEM2Q9BV94 578 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 DEFB126Q9BYW3 111 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 CCDC90BQ9GZT6 254 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 SIRPDQ9H106 197 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 DUSP21Q9H596 190 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 PTGES2Q9H7Z7 377 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRA2Q9H9E1 313 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ADGRL4Q9HBW9 690 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 IL20Q9NYY1 176 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 UBAP1Q9NZ09 502 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM9Q9P0T7 183 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 EIF3KQ9UBQ5 218 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 SEC14L4Q9UDX3 406 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ERGIC3Q9Y282 383 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF256Q9Y2P7 627 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 YARS2Q9Y2Z4 477 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF337Q9Y3M9 751 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 KCNE3Q9Y6H6 103 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 COMMD3-BMI1R4GMX3 469 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 U3KQA8 63 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 XIRP2A4UGR9 3374 aa1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 SPTBN5Q9NRC6 3674 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 LAMA2P24043 3122 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-205ENST00000506779 ATG2AQ2TAZ0 1938 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GON4LQ3T8J9 2241 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PRRC2BQ5JSZ5 2229 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NCOR1O75376 2440 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DOCK8Q8NF50 2099 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MYOFQ9NZM1 2061 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A087WZY1 265 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 IGHV1-45A0A0A0MS14 117 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ARPC4-TTLL3A0A0A6YYG9 625 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A0B4J2E0 115 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TRBV11-1A0A0K0K1C0 115 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A0U1RRA0 63 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A1B0GWA3 101 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A1B0GX12 115 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TRIM64CA6NLI5 447 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RIIAD1A6NNX1 92 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 A8MUA0 341 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF99A8MXY4 864 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CDX4O14627 284 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 IMPA2O14732 288 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms