RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CPT2P23786 658 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 BLVRBP30043 206 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 FCGR2CP31995 323 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 FHITP49789 147 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 FAM76BQ5HYJ3 339 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 SHDQ96IW2 340 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 OR5B2Q96R09 309 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 PECRQ9BY49 303 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 TPSD1Q9BZJ3 242 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 PARP11Q9NR21 331 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 B3GALT5Q9Y2C3 310 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 RPH3AQ9Y2J0 694 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 POLR1DQ9Y2S0 133 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 MASP2O00187 686 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 CST4P01036 141 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 GIMD1P0DJR0 217 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 NAT2P11245 290 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 DVL1P1P54792 670 aaPredicted RBP10.44□□□□□ -0.74
UBE3D-206ENST00000505226 GABREP78334 506 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 S100A12P80511 92 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 C17orf67Q0P5P2 114 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 KISS1Q15726 138 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 THEM4Q5T1C6 240 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 CDCP2Q5VXM1 449 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 OR14K1Q8NGZ2 314 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 MRPL24Q96A35 216 aaKnown RBP10.44□□□□□ -0.74
UBE3D-206ENST00000505226 DDIT4LQ96D03 193 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 MVB12AQ96EY5 273 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 ZDHHC12Q96GR4 267 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
UBE3D-206ENST00000505226 SMCO4Q9NRQ5 59 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 TRAF3IP2O43734 574 aaPredicted RBP10.44□□□□□ -0.74
UBE3D-206ENST00000505226 CCL1P22362 96 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 PTAFRP25105 342 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 ADH6P28332 368 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 CLRN1P58418 232 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 SHHQ15465 462 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 UBE2V2Q15819 145 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 ALKBH4Q9NXW9 302 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 EDARQ9UNE0 448 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 RALGAPA1Q6GYQ0 2036 aa10.44□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PNV4 684 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 FIGNL2A6NMB9 653 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 DEDDO75618 318 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF84P51523 738 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SMAD4Q13485 552 aaKnown RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 C6orf201Q7Z4U5 140 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 NOXO1Q8NFA2 376 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 OR2AJ1Q8NGZ0 328 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 C20orf24Q9BUV8 137 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 STARD10Q9Y365 291 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 CNTRLQ7Z7A1 2325 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 FREM2Q5SZK8 3169 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 FRYLO94915 3013 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 VSTM2BA6NLU5 285 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 STMND1H3BQB6 276 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 K7EPK0 472 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 TAAR5O14804 337 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 IFNA2P01563 188 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SERPINA2P20848 420 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 FBXO46Q6PJ61 603 aaPredicted RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SLC25A47Q6Q0C1 308 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 PPP1R3BQ86XI6 285 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 FAM71E2Q8N5Q1 922 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SEMA6DQ8NFY4 1073 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SLC25A43Q8WUT9 341 aaPredicted RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 EMG1Q92979 244 aaKnown RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 WFDC1Q9HC57 220 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 MED19A0JLT2 244 aaPredicted RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 A6NLC8 198 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 C1QL1O75973 258 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 PET100P0DJ07 73 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 C15orf54Q8N8G6 183 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 SCGB3A2Q96PL1 93 aa10.43□□□□□ -0.74
UBE3D-206ENST00000505226 URM1Q9BTM9 101 aaKnown RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
UBE3D-206ENST00000505226 VPS13AQ96RL7 3174 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 NME2P1O60361 137 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 PAX6P26367 422 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 RAB5BP61020 215 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 EIF2S3LQ2VIR3 472 aaKnown RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 AWAT1Q58HT5 328 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 UEVLDQ8IX04 471 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 NFAM1Q8NET5 270 aaPredicted RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 PRRX2Q99811 253 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF2Q9BSG1 426 aaPredicted RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 MOB1AQ9H8S9 216 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 GSN-AS1Q9NRJ2 163 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF701Q9NV72 531 aaPredicted RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 TUBD1Q9UJT1 453 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PR77 199 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 UBE2CO00762 179 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 SNRNP70P08621 437 aaKnown RBP10.42□□□□□ -0.74
UBE3D-206ENST00000505226 QDPRP09417 244 aa10.42□□□□□ -0.74
UBE3D-206ENST00000505226 AGAP20933 346 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms