RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 STUB1Q9UNE7 303 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 PIGLQ9Y2B2 252 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 TRAV8-7A0A075B6U6 113 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 PTGES3LE9PB15 166 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 LMO1P25800 156 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 GCH1P30793 250 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 TIGD6Q17RP2 521 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 SPATC1Q76KD6 591 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 TTTY10Q9BZA0 68 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 NCOR1P1Q9H4R4 102 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 CXorf56Q9H5V9 222 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 UBTD1Q9HAC8 227 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 SERPINA3P01011 423 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 PRSS12P56730 875 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 MZT1Q08AG7 82 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 ARMCX4Q5H9R4 360 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 LHFPL2Q6ZUX7 228 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 RDH10Q8IZV5 341 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 ADAT1Q9BUB4 502 aaKnown RBP6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 CACNG6Q9BXT2 260 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 CHODLQ9H9P2 273 aa6.97□□□□□ -1.29
CDC42SE2-208ENST00000505065 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 GABRPO00591 440 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 SYT7O43581 403 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 HPXP02790 462 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 ZNF154Q13106 437 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 STUMQ69YW2 141 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 ZNF841Q6ZN19 808 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 RNF144BQ7Z419 303 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 CDH24Q86UP0 819 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 RDH5Q92781 318 aa6.96□□□□□ -1.29
CDC42SE2-208ENST00000505065 NRASP01111 189 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAHP16930 419 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 MAPK3P27361 379 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 MTNR1BP49286 362 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 LOXL1Q08397 574 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 SHEQ5VZ18 495 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 LRRC28Q86X40 367 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 NKAIN3Q8N8D7 197 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR13C5Q8NGS8 318 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 C8orf46Q8TAG6 207 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 HPS1Q92902 700 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 NXF2Q9GZY0 626 aaKnown RBP6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 BAHCC1Q9P281 2608 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF146Q15072 292 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 CR1LQ2VPA4 569 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF404Q494X3 552 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 GCSAMQ8N6F7 178 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 NRGNQ92686 78 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 PTX4Q96A99 478 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 EDARQ9UNE0 448 aa6.96□□□□□ -1.3
CDC42SE2-208ENST00000505065 IGKV1-12A0A0C4DH73 117 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 A0A1B0GVI7 797 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 IGKV1D-12P01611 117 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 SLC6A9P48067 706 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 SRP9P49458 86 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 FTMTQ8N4E7 242 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 SCCPDHQ8NBX0 429 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 NUDT16L1Q9BRJ7 211 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 BRD7Q9NPI1 651 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 C14orf119Q9NWQ9 140 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TXNL4BQ9NX01 149 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 ANKRD17O75179 2603 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 J3QT63 122 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 RPP14O95059 124 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 PRKACBP22694 351 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 DNASE1P24855 282 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 GNG3P63215 75 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TPRA1Q86W33 373 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR2V2Q96R30 315 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 RTL8AQ9BWD3 113 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TM2D1Q9BX74 207 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 RAB1BQ9H0U4 201 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 FZR1Q9UM11 496 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 CA6P23280 308 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 ATP6V1E1P36543 226 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TSTQ16762 297 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 ACSM3Q53FZ2 586 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 CALHM1Q8IU99 346 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 TGIF2LYQ8IUE0 185 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR13C3Q8NGS6 347 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 FGGYQ96C11 551 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR14A2Q96R54 314 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 LINC00574Q9H8X3 128 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 CHCHD3Q9NX63 227 aaKnown RBP6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 DOPEY2Q9Y3R5 2298 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 CACNA1DQ01668 2161 aa6.95□□□□□ -1.3
CDC42SE2-208ENST00000505065 PPIAL4EA0A075B759 164 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PPIAL4CA0A0B4J2A2 164 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF850A8MQ14 1090 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PPIAL4DF5H284 164 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 F5H5P2 479 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 AKR7A2O43488 359 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PPIAL4FP0DN26 164 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 COL8A2P25067 703 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms