RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OR5M11Q96RB7 305 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 PIMREGQ9BSJ6 248 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 RTL8AQ9BWD3 113 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 PLEKHA1Q9HB21 404 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 ISYNA1Q9NPH2 558 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF281Q9Y2X9 895 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 DSCAML1Q8TD84 2053 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 ANKRD61A6NGH8 418 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TRIM64A6NGJ6 449 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TRIM64BA6NI03 449 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 A6NIN4 97 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 OR5B21A6NL26 309 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM210A6NLX4 147 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 CLDN25C9JDP6 229 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 SERPINA3P01011 423 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 CELP19835 753 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 PMELP40967 661 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 NR4A2P43354 598 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 GNG3P63215 75 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 GPR50Q13585 617 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 MED22Q15528 200 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 MPPED2Q15777 294 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TBCEQ15813 527 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 KCTD21Q4G0X4 260 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 CEP78Q5JTW2 689 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 UTS2BQ765I0 119 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 MOGAT3Q86VF5 341 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 ZFP41Q8N8Y5 198 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 OR1M1Q8NGA1 313 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 OR13C3Q8NGS6 347 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 Q8TCH9 128 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 GPR148Q8TDV2 347 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 RGP1Q92546 391 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 GHSRQ92847 366 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 FGGYQ96C11 551 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 RNF170Q96K19 258 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 PGLYRP3Q96LB9 341 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 REG4Q9BYZ8 158 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 BPESC1Q9GZL8 116 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 CHST5Q9GZS9 411 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 FGF23Q9GZV9 251 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TLNRD1Q9H1K6 362 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 FN3KRPQ9HA64 309 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM106BQ9NUM4 274 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 A0A096LNT2 108 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF732B4DXR9 585 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 GATBO75879 557 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 GRPP07492 148 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 VSIG8P0DPA2 414 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF20P17024 532 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 THBS2P35442 1172 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 MAP2K4P45985 399 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 GPR6P46095 362 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 GPM6AP51674 278 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF154Q13106 437 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 UBE2V2Q15819 145 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 YIF1BQ5BJH7 314 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 PLCXD3Q63HM9 321 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 PEG10Q86TG7 708 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 C11orf53Q8IXP5 236 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 SPARTQ8N0X7 666 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 SVOPQ8N4V2 548 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 PARP16Q8N5Y8 322 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 OR11L1Q8NGX0 322 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF420Q8TAQ5 688 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 RAB1CQ92928 201 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 ACOT13Q9NPJ3 140 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 GPR173Q9NS66 373 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 UFSP2Q9NUQ7 469 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 DHDHQ9UQ10 334 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 LRCH1Q9Y2L9 728 aa10.03□□□□□ -0.8
PDLIM5-208ENST00000504489 TRBV5-5A0A0J9YX44 114 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 PQLC2LA1A4F0 135 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 LRP5LA4QPB2 252 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 A6NLC8 198 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 H7C1Q1 480 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 ALX3O95076 343 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 FSTL3O95633 263 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 CD2P06729 351 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 IRF2P14316 349 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 CFHR2P36980 270 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 CHN2P52757 468 aa10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 EMX1Q04741 257 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-208ENST00000504489 MLLT11Q13015 90 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms