RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IL3RAP26951 378 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CALRP27797 417 aaKnown RBP1.14□□□□□ -2.23
SMC4-227ENST00000497984 SLC1A2P43004 574 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 OR1G1P47890 313 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 AP1S2P56377 157 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 KLF3P57682 345 aaPredicted RBP1.14□□□□□ -2.23
SMC4-227ENST00000497984 ZNF33AQ06730 810 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 TFDP2Q14188 446 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 ITIH4Q14624 930 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 MAPRE2Q15555 327 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 SPANXN2Q5MJ10 180 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 LDLRAD2Q5SZI1 272 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 TMEM53Q6P2H8 277 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 Q6ZS52 159 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 LUZP2Q86TE4 346 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 BBS5Q8N3I7 341 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 RPRMLQ8N4K4 120 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 OR8K3Q8NH51 312 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 OR51F2Q8NH61 342 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 OR1S1Q8NH92 325 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 RAB1CQ92928 201 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 FAM19A4Q96LR4 140 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CSPG4P5Q96PW8 444 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 ALS2CR12Q96Q35 445 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 FAM60AQ9NP50 221 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CCNB1IP1Q9NPC3 277 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 HEBP1Q9NRV9 189 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 RRP15Q9Y3B9 282 aaKnown RBP1.14□□□□□ -2.23
SMC4-227ENST00000497984 CACNA1GO43497 2377 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 LOC102724200A0A096LPH7 203 aaPredicted RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 IGHV6-1A0A0B4J1U7 121 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 CTAGE15A4D2H0 777 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 BCKDKO14874 412 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 SLC19A2O60779 497 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 IFNW1P05000 195 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 TACSTD2P09758 323 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 GFAPP14136 432 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 HMOX2P30519 316 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 FOXA1P55317 472 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 IRF8Q02556 426 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 LRRC74AQ0VAA2 488 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 TPBGQ13641 420 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 OR1Q1Q15612 314 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 TSC22D1Q15714 1073 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 PDZD11Q5EBL8 140 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 TWF2Q6IBS0 349 aaKnown RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 TRMT10CQ7L0Y3 403 aaKnown RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 BZW1Q7L1Q6 419 aaKnown RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 EIF3MQ7L2H7 374 aaKnown RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 CTAGE6Q86UF2 777 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 COMTD1Q86VU5 262 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 WDR31Q8NA23 367 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 ZFP62Q8NB50 900 aaPredicted RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 CCDC148Q8NFR7 591 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 MUC7Q8TAX7 377 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 ASZ1Q8WWH4 475 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 BPIFA3Q9BQP9 254 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 VSIRQ9H7M9 311 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 RDH14Q9HBH5 336 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 OR2S2Q9NQN1 319 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 CA10Q9NS85 328 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 C20orf96Q9NUD7 363 aaPredicted RBP1.13□□□□□ -2.23
SMC4-227ENST00000497984 CES1P1Q9UKY3 287 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 RABL2BQ9UNT1 228 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 SSH2Q76I76 1423 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 MROH7Q68CQ1 1323 aa1.13□□□□□ -2.23
SMC4-227ENST00000497984 A0A075B6Q4 140 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 H3BQ85 93 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 MYL12BO14950 172 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 CACNG3O60359 315 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 TDP2O95551 362 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 CBR1P16152 277 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 GSTM3P21266 225 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 RGS6P49758 472 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 ATP5G2Q06055 141 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 RCN1Q15293 331 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 KRTAP25-1Q3LHN0 102 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 STEAP4Q687X5 459 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 SSX9Q7RTT3 188 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 OFCC1Q8IZS5 231 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 OR4D6Q8NGJ1 314 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 TSEN15Q8WW01 171 aaKnown RBP1.12□□□□□ -2.23
SMC4-227ENST00000497984 YIPF6Q96EC8 236 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 RDH12Q96NR8 316 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 DSN1Q9H410 356 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 ELOVL6Q9H5J4 265 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 LYRM4Q9HD34 91 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 RAB20Q9NX57 234 aa1.12□□□□□ -2.23
SMC4-227ENST00000497984 A0A0G2JMP0 313 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 A0A0X1KG70 313 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 GOLGA8JA6NMD2 632 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 LINC01619G3V211 115 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 PSCAO43653 123 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 ZNF73O43830 326 aaPredicted RBP1.11□□□□□ -2.23
SMC4-227ENST00000497984 DNAJB6O75190 326 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 UPK1BO75841 260 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 SMC2O95347 1197 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 CDS2O95674 445 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 IGHV3-53P01767 116 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 UBCP0CG48 685 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms