RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 GABRA1P14867 456 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 ARSBP15848 533 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 RAB6AP20340 208 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 KIR2DL2P43627 348 aaPredicted RBP17.06■□□□□ 0.32
ACTN4-208ENST00000497637 MAP2K3P46734 347 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 EFNB2P52799 333 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 DGCR2P98153 550 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 TMEM69Q5SWH9 247 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 OR4D6Q8NGJ1 314 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 OR6K3Q8NGY3 331 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 SMIM4Q8WVI0 70 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 PLEKHF2Q9H8W4 249 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 DIABLOQ9NR28 239 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 FBLN5Q9UBX5 448 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 A0A0G2JNJ9 132 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 XRCC2O43543 280 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 SSX4O60224 188 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 PFDN1O60925 122 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 BPNT1O95861 308 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 GLI4P10075 376 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 HOXB1P14653 301 aaPredicted RBP17.05■□□□□ 0.32
ACTN4-208ENST00000497637 TAS2R20P59543 309 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 PLP2Q04941 152 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 ZNF57Q68EA5 555 aaPredicted RBP17.05■□□□□ 0.32
ACTN4-208ENST00000497637 ZNF585AQ6P3V2 769 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 CCDC36Q8IYA8 594 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 SEMA6DQ8NFY4 1073 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 AKAP1Q92667 903 aaKnown RBP eCLIP17.05■□□□□ 0.322e-12■■■■□ 20.2
ACTN4-208ENST00000497637 ITFG2Q969R8 447 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 SPSB4Q96A44 273 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 CHST5Q9GZS9 411 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 NOX3Q9HBY0 568 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 Q9UFV3 132 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 RAB22AQ9UL26 194 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 PIGLQ9Y2B2 252 aa17.05■□□□□ 0.32
ACTN4-208ENST00000497637 LOC100509620A0A075B734 347 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 A0A0A6YYH2 397 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 IGKV1-9A0A0C4DH69 117 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 MBD3L4A6NDZ8 208 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 MBD3L3A6NE82 208 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 ZNF503-AS2A6NEH8 195 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 MBD3L5A6NJ08 208 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 A6NJ64 397 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 GABARAPH6UMI1 98 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 LYRM1O43325 122 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 TMIGD3P0DMS9 266 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 ZNF93P35789 620 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 RAB1AP62820 205 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 TGFBR3Q03167 851 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 RIPPLY1Q0D2K3 151 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 SNTB1Q13884 538 aaKnown RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 TBRG1Q3YBR2 411 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 Q5PR19 223 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 PRSS57Q6UWY2 283 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 DNM1P46Q6ZS02 220 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 LIX1LQ8IVB5 337 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 MBD3L2Q8NHZ7 208 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 TMEM158Q8WZ71 300 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 PPP1R14BQ96C90 147 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 ZC3HAV1LQ96H79 300 aaKnown RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 BOD1Q96IK1 185 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 NEDD4LQ96PU5 975 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 NKX3-1Q99801 234 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 RBFOX1Q9NWB1 397 aaKnown RBP17.04■□□□□ 0.32
ACTN4-208ENST00000497637 ARID1AO14497 2285 aa17.04■□□□□ 0.32
ACTN4-208ENST00000497637 CIB4A0PJX0 185 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 GGT3PA6NGU5 568 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 CRLF1O75462 422 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 CRHP06850 196 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 CD3GP09693 182 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 FAHP16930 419 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 IGHV1-2P23083 117 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 STOMP27105 288 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 QRFPP83859 136 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 Q6ZT83 130 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 GCNT2Q8N0V5 402 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 LRRC75A-AS1Q8N1F1 130 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 CIARTQ8N365 385 aaPredicted RBP17.03■□□□□ 0.32
ACTN4-208ENST00000497637 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 POM121L2Q96KW2 1035 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 KCNK15Q9H427 330 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 PLSCR4Q9NRQ2 329 aa17.03■□□□□ 0.32
ACTN4-208ENST00000497637 SONP18583 2426 aaKnown RBP17.02■□□□□ 0.32
ACTN4-208ENST00000497637 hCG_38984A0A1B0GV85 526 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 WDR1O75083 606 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 SERPINA5P05154 406 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 HCKP08631 526 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 FAM157BP0CG42 384 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 GSK3AP49840 483 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 GPR176Q14439 515 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 UBE2V2Q15819 145 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 HIKESHIQ53FT3 197 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 ZBTB37Q5TC79 503 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 TMEM42Q69YG0 159 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 OR2W3Q7Z3T1 314 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 ANGPTL5Q86XS5 388 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 DUSP18Q8NEJ0 188 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 OR2AE1Q8NHA4 323 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 FCAMRQ8WWV6 532 aa17.02■□□□□ 0.32
ACTN4-208ENST00000497637 C7orf50Q9BRJ6 194 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms