RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 GUCA2BQ16661 112 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RSPO1Q2MKA7 263 aaPredicted RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 CDNFQ49AH0 187 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 COX19Q49B96 90 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 AKIRIN2Q53H80 203 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 LRRC10Q5BKY1 277 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 PDZD11Q5EBL8 140 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 TMEM31Q5JXX7 168 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 DRAM2Q6UX65 266 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 SLC30A8Q8IWU4 369 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 PGAM4Q8N0Y7 254 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 ZNF433Q8N7K0 673 aaPredicted RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 OR4K17Q8NGC6 315 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 OR6X1Q8NH79 312 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 NT5CQ8TCD5 201 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RNASEH2CQ8TDP1 164 aaKnown RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 TMEM158Q8WZ71 300 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RGP1Q92546 391 aaPredicted RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 WDR34Q96EX3 536 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 DYNLL2Q96FJ2 89 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RNF185Q96GF1 192 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 SLC35E1Q96K37 410 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RDH12Q96NR8 316 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 OR2M2Q96R28 347 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 BEX2Q9BXY8 128 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 NXF2Q9GZY0 626 aaKnown RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 TOLLIPQ9H0E2 274 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 VCX3BQ9H321 246 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 DHX35Q9H5Z1 703 aaKnown RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 TRIM45Q9H8W5 580 aaPredicted RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 SLCO1B3Q9NPD5 702 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 IFT46Q9NQC8 304 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 RGS18Q9NS28 235 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 TRMT112Q9UI30 125 aaKnown RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 ZNF225Q9UK10 706 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 ZNF257Q9Y2Q1 563 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 POLR3HQ9Y535 204 aaPredicted RBP2.45□□□□□ -2.02
CLK1-214ENST00000496205 WIF1Q9Y5W5 379 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 ATRXP46100 2492 aa2.45□□□□□ -2.02
CLK1-214ENST00000496205 MAP3K15Q6ZN16 1313 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 KIR2DS1A0A191URI9 304 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 FAM240AA0A1B0GVK7 77 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 LINC01619G3V211 115 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 TRAPPC3O43617 180 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 ENSAO43768 121 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 KLF8O95600 359 aaPredicted RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 IGHV4-34P06331 123 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 MMP7P09237 267 aaPredicted RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 ZDHHC11BP0C7U3 371 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 LIMS3P0CW19 117 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 LIMS4P0CW20 117 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 C8orf88P0DMB2 117 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 HSPD1P10809 573 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 THRAP10827 490 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 TDGF1P13385 188 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 NQO1P15559 274 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 RAB3AP20336 220 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 PVALBP20472 110 aaPredicted RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 PSMB9P28065 219 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 PSMB5P28074 263 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 MYCNOSP40205 109 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 HCAR3P49019 387 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 TUFMP49411 452 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 TDGF1P3P51864 188 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 TAS2R31P59538 309 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 HERVK_113P61574 105 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 BNIP2Q12982 314 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 LPCAT4Q643R3 524 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 ARRDC1Q8N5I2 433 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 FAM71E2Q8N5Q1 922 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 TMEM156Q8N614 296 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 METTL13Q8N6R0 699 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 OR1S1Q8NH92 325 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 PIFOQ8TCI5 191 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 NTAN1Q96AB6 310 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 CREB3L1Q96BA8 519 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 DCPSQ96C86 337 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 FLYWCH2Q96CP2 140 aaKnown RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 HAUS1Q96CS2 278 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 AURKBQ96GD4 344 aaPredicted RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 RNF145Q96MT1 663 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 RBBP8Q99708 897 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 GABRG3Q99928 467 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 GABARAPL3Q9BY60 117 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 ARV1Q9H2C2 271 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 RHOFQ9HBH0 211 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 RDH14Q9HBH5 336 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 FBXO6Q9NRD1 293 aaPredicted RBP2.44□□□□□ -2.02
CLK1-214ENST00000496205 ANAPC11Q9NYG5 84 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 COMMD9Q9P000 198 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 RPS6KB2Q9UBS0 482 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 RAB22AQ9UL26 194 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 SIGLEC9Q9Y336 463 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 CEMIPQ8WUJ3 1361 aa2.44□□□□□ -2.02
CLK1-214ENST00000496205 C9orf84Q5VXU9 1444 aa2.43□□□□□ -2.02
CLK1-214ENST00000496205 TDRD6O60522 2096 aaKnown RBP2.43□□□□□ -2.02
CLK1-214ENST00000496205 LTBP1Q14766 1721 aa2.43□□□□□ -2.02
CLK1-214ENST00000496205 IGLV1-36A0A0B4J1U3 117 aa2.43□□□□□ -2.02
CLK1-214ENST00000496205 OR6C70A6NIJ9 312 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms