RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ELF3P78545 371 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-214ENST00000496043 EFNB1P98172 346 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 IKZF1Q13422 519 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 ATP6AP1Q15904 470 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF829Q3KNS6 432 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-214ENST00000496043 CEACAM21Q3KPI0 293 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 STUMQ69YW2 141 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 MOB3CQ70IA8 216 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 COMMD2Q86X83 199 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 ZDHHC13Q8IUH4 622 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 CMTM4Q8IZR5 234 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 TBC1D15Q8TC07 691 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 OR8B4Q96RC9 309 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 MNTQ99583 582 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 WDR13Q9H1Z4 485 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 TNFRSF19Q9NS68 423 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 SNTG1Q9NSN8 517 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 IKZF2Q9UKS7 526 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 AP4S1Q9Y587 144 aa10.52□□□□□ -0.73
PTPRF-214ENST00000496043 A0A1B0GUS0 222 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 A0A1B0GVI7 797 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 A0A1B0GW55 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 FAM181BA6NEQ2 426 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 SLC22A31A6NKX4 558 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 MITFO75030 526 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 MTRF1O75570 445 aaKnown RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 MELTFP08582 738 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L2P0CJ85 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L3P0CJ86 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L4P0CJ87 422 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L5P0CJ88 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L6P0CJ89 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L7P0CJ90 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 GLRA1P23415 457 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 ZBTB37Q5TC79 503 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 AADACL4Q5VUY2 407 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 SLX4IPQ5VYV7 408 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4L9Q6RFH8 374 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 FIP1L1Q6UN15 594 aaKnown RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF788Q6ZQV5 615 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 VMO1Q7Z5L0 202 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 FGFRL1Q8N441 504 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 TCEANCQ8N8B7 351 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 TMEM163Q8TC26 289 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 OR51E1Q8TCB6 317 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 HPSE2Q8WWQ2 592 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 PPP1R14AQ96A00 147 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 CNN2Q99439 309 aaKnown RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 APOL4Q9BPW4 351 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 FGF23Q9GZV9 251 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-214ENST00000496043 OR51I2Q9H344 312 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 GPR84Q9NQS5 396 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 NLKQ9UBE8 527 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 DUX4Q9UBX2 424 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 ENOPH1Q9UHY7 261 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 COPS3Q9UNS2 423 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 MMP24Q9Y5R2 645 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 POMT1Q9Y6A1 747 aa10.51□□□□□ -0.73
PTPRF-214ENST00000496043 OR2AT4A6NND4 320 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ZAR1LA6NP61 321 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF670-ZNF695F2Z2N8 137 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ACAA1P09110 424 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 OMGP23515 440 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 GABRA2P47869 451 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 CEP78Q5JTW2 689 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 NXNL2Q5VZ03 156 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 C12orf73Q69YU5 71 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 KDM4DQ6B0I6 523 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF322Q6U7Q0 402 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 C1orf122Q6ZSJ8 110 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 BCDIN3DQ7Z5W3 292 aaKnown RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 AMIGO2Q86SJ2 522 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 SLC35F2Q8IXU6 374 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 KIR3DL3Q8N743 410 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ANGPTL6Q8NI99 470 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 SSMEM1Q8WWF3 244 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 DUS3LQ96G46 650 aaKnown RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 SLITRK2Q9H156 845 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF696Q9H7X3 374 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 BEX1Q9HBH7 125 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 CLN6Q9NWW5 311 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 RASL12Q9NYN1 266 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 SLC25A10Q9UBX3 287 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 NUFIP1Q9UHK0 495 aaKnown RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 ENPP5Q9UJA9 477 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 PIGLQ9Y2B2 252 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 CAB39Q9Y376 341 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-214ENST00000496043 FAM96BQ9Y3D0 163 aa10.5□□□□□ -0.73
PTPRF-214ENST00000496043 TENM1Q9UKZ4 2725 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 OR5B21A6NL26 309 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 PRR32B1ATL7 298 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 LOC110117498-PIK3R3F6TDL0 507 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 SIGLEC5O15389 551 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms