RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FAM81AQ8TBF8 368 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 OR51E1Q8TCB6 317 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 GATAD2BQ8WXI9 593 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 H1FXQ92522 213 aaKnown RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 NRBF2Q96F24 287 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 FAM71F1Q96KD3 344 aaPredicted RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 APOL4Q9BPW4 351 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 MROQ9BYG7 248 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 YIPF3Q9GZM5 350 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 PBOV1Q9GZY1 135 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 PRDM13Q9H4Q3 707 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 RGCCQ9H4X1 137 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 NIPAL2Q9H841 368 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 ZMAT3Q9HA38 289 aaKnown RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 ACOXLQ9NUZ1 547 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 H2AFY2Q9P0M6 372 aaPredicted RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 ONECUT1Q9UBC0 465 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 ZNF391Q9UJN7 358 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 IKZF2Q9UKS7 526 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 GTF2A1LQ9UNN4 478 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 IGHV1-69DA0A0B4J2H0 117 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 A0A0U1RQK1 487 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 A6NIN4 97 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 TMEM210A6NLX4 147 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 G3V2T6 193 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 CLDN34H7C241 214 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 IGHV1-69P01742 117 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 MELTFP08582 738 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 GLRA1P23415 457 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 TGM4P49221 684 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 BPIFB3P59826 476 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 SRSF4Q08170 494 aaKnown RBP7.91□□□□□ -1.14
MSH5-218ENST00000494646 RIPPLY1Q0D2K3 151 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 BNIP1Q12981 228 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 SNCBQ16143 134 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 CDONQ4KMG0 1287 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 FAM76BQ5HYJ3 339 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 FAHD1Q6P587 224 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 SHISA2Q6UWI4 295 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 PLEKHG7Q6ZR37 379 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 MEPCEQ7L2J0 689 aaKnown RBP7.91□□□□□ -1.14
MSH5-218ENST00000494646 THAP5Q7Z6K1 395 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 KIR3DL3Q8N743 410 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 LY6G5BQ8NDX9 201 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 OR10Z1Q8NGY1 313 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 HPSE2Q8WWQ2 592 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 RAB3IPQ96QF0 476 aaPredicted RBP7.91□□□□□ -1.14
MSH5-218ENST00000494646 OR8B4Q96RC9 309 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 IL4I1Q96RQ9 567 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 CHIAQ9BZP6 476 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 TLNRD1Q9H1K6 362 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 NOX4Q9NPH5 578 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 GPR84Q9NQS5 396 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 SIRT7Q9NRC8 400 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 KRT84Q9NSB2 600 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 PIGLQ9Y2B2 252 aa7.91□□□□□ -1.14
MSH5-218ENST00000494646 ZNF816-ZNF321PA0A0X1KG74 233 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ACOD1A6NK06 481 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 H3BSH0 61 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 RPLP1P05386 114 aaKnown RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 CRYBA1P05813 215 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 NDUFB7P17568 137 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 POLR2IP36954 125 aaKnown RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 RIDAP52758 137 aaKnown RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 CXCR4P61073 352 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ESRRGP62508 458 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 IL13RA1P78552 427 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 MFGE8Q08431 387 aaPredicted RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 DGUOKQ16854 277 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 LRRC10Q5BKY1 277 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ATPAF1Q5TC12 328 aaPredicted RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 LCN1P1Q5VSP4 162 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 STUMQ69YW2 141 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 DEGS2Q6QHC5 323 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ZNF788Q6ZQV5 615 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 SLC35F2Q8IXU6 374 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ZNF679Q8IYX0 411 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 BATF2Q8N1L9 274 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 TBC1D15Q8TC07 691 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 LRTOMTQ8WZ04 291 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 ZNF488Q96MN9 340 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 GAFA1Q96PS6 74 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 CNN2Q99439 309 aaKnown RBP7.9□□□□□ -1.14
MSH5-218ENST00000494646 TBX5Q99593 518 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 DCTN5Q9BTE1 182 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 SEMA6AQ9H2E6 1030 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 OR51I2Q9H344 312 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 FAM206AQ9NX38 181 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 AP4S1Q9Y587 144 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 TMEM14AQ9Y6G1 99 aa7.9□□□□□ -1.14
MSH5-218ENST00000494646 MGAM2Q2M2H8 2515 aa7.9□□□□□ -1.15
MSH5-218ENST00000494646 A0A0U1RQV5 110 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 OR2AT4A6NND4 320 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 ZNF670-ZNF695F2Z2N8 137 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 ZNF254O75437 659 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 RPP14O95059 124 aaKnown RBP7.89□□□□□ -1.15
MSH5-218ENST00000494646 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 TTRP02766 147 aa7.89□□□□□ -1.15
MSH5-218ENST00000494646 ACAA1P09110 424 aaPredicted RBP7.89□□□□□ -1.15
MSH5-218ENST00000494646 PSG2P11465 335 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms