RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GATAD2BQ8WXI9 593 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 RPL3LQ92901 407 aaKnown RBP11.37□□□□□ -0.59
COL1A1-208ENST00000494334 CNBD2Q96M20 576 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 GAL3ST1Q99999 423 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PDCD1LG2Q9BQ51 273 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 METTL17Q9H7H0 456 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF665Q9H7R5 613 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 SCN3BQ9NY72 215 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PPIAL4AQ9Y536 164 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PCDHGB5Q9Y5G0 923 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 TANC2Q9HCD6 1990 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ABCA1O95477 2261 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 TRBV2A0A0J9YWF9 115 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 hCG_1807616A0A1W2PRN6 198 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 ZFPL1O95159 310 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 FSTL3O95633 263 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 LALBAP00709 142 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 LHBP01229 141 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 IGHV2-5P01817 119 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 CDK1P06493 297 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 CCDC159P0C7I6 412 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF16P17020 682 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 GNG3P63215 75 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 CDK5R1Q15078 307 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 RPL22L1Q6P5R6 122 aaKnown RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 WDR82Q6UXN9 313 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 SCCPDHQ8NBX0 429 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 OR51A4Q8NGJ6 313 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 OR5AK2Q8NH90 309 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 RPS4Y2Q8TD47 263 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 SGCDQ92629 289 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF184Q99676 751 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 OR51I2Q9H344 312 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 PAK1IP1Q9NWT1 392 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 UBAP1Q9NZ09 502 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 HHLA2Q9UM44 414 aa11.36□□□□□ -0.59
COL1A1-208ENST00000494334 SIRT4Q9Y6E7 314 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 TEP1Q99973 2627 aaKnown RBP11.36□□□□□ -0.59
COL1A1-208ENST00000494334 ANKRD61A6NGH8 418 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM212A6NML5 194 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 OGG1O15527 345 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 TGFAP01135 160 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 EGR1P18146 543 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 CFHR2P36980 270 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 SLC35A2P78381 396 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 UBE2V2Q15819 145 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 SFRP4Q6FHJ7 346 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 MUC20Q8N307 709 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 SPICQ8N5J4 248 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 BOLLQ8N9W6 283 aaKnown RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 LINC01356Q8N9X3 169 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 DEFB108BQ8NET1 73 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 LRRC29Q8WV35 223 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 MYDGFQ969H8 173 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 FGGYQ96C11 551 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 RAB39BQ96DA2 213 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 ADAT3Q96EY9 351 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM246Q9BRR3 403 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 CHST5Q9GZS9 411 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 COMMD4Q9H0A8 199 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 ERVK-18Q9QC07 812 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 TPRKBQ9Y3C4 175 aa11.35□□□□□ -0.59
COL1A1-208ENST00000494334 YLPM1P49750 1951 aaKnown RBP11.35□□□□□ -0.59
COL1A1-208ENST00000494334 PQLC2LA1A4F0 135 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 CEACAM18A8MTB9 384 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 B4DSR2 109 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 LGALS8O00214 317 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 MYL12BO14950 172 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 RHBDL1O75783 438 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 SERPINA3P01011 423 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 CRHBPP24387 322 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 CD80P33681 288 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 WNT4P56705 351 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 DOC2BQ14184 412 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 OR10Z1Q8NGY1 313 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 PP6455Q8WZ26 134 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 LPAR2Q9HBW0 351 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 TRIM36Q9NQ86 728 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
COL1A1-208ENST00000494334 OOEPA6NGQ2 149 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 SRRM5B3KS81 715 aa11.33□□□□□ -0.6
COL1A1-208ENST00000494334 F5H0A9 414 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 TNFRSF13BO14836 293 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-208ENST00000494334 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms