RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TCRBV16S1A1N1A0A5B0 115 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 NPIPA7E9PJI5 369 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 H0YGG7 62 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 CLDN4O14493 209 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 XKRYO14609 159 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 FOXS1O43638 330 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ADAM11O75078 769 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 SLC25A12O75746 678 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 AMY2AP04746 511 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 CT62P0C5K7 136 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF735P0CB33 412 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 SMIM6P0DI80 62 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 NPIPA8P0DM63 369 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 CD79AP11912 226 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 LUMP51884 338 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 RIDAP52758 137 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ARF3P61204 181 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 FUT7Q11130 342 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 EXOSC7Q15024 291 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 PRTGQ2VWP7 1150 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 TMEM244Q5VVB8 128 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 FAAP20Q6NZ36 180 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 DNM1P34Q6PK57 102 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 C17orf107Q6ZR85 190 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 BPIFB2Q8N4F0 458 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 CSNK1A1LQ8N752 337 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF614Q8N883 585 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 TMEM185AQ8NFB2 350 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 M1APQ8TC57 530 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ELP5Q8TE02 316 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 SLC25A28Q96A46 364 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 MMABQ96EY8 250 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 Q96M85 177 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 UQCC2Q9BRT2 126 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF471Q9BX82 626 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 ATG5Q9H1Y0 275 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 TMEM185BQ9H7F4 350 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 RNF122Q9H9V4 155 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 VSX1Q9NZR4 365 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 Q9UFV3 132 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 RAB22AQ9UL26 194 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 NOP16Q9Y3C1 178 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 WIF1Q9Y5W5 379 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 DSCAMO60469 2012 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 KIAA1549Q9HCM3 1950 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 A0A0A6YYC8 382 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 A0A1W2PQD3 144 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF860A6NHJ4 632 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR2AT4A6NND4 320 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 POM121CA8CG34 1229 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 I3L1I5 382 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 SULT2B1O00204 365 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 LGALS8O00214 317 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 SMAD7O15105 426 aaKnown RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 BPNT1O95861 308 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 MAS1P04201 325 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ERCC1P07992 297 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ITGA5P08648 1049 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 GLI4P10075 376 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 CRABP1P29762 137 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ECI1P42126 302 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 KIR3DL2P43630 455 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 SOX2P48431 317 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 HSD17B7P56937 341 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 BTG2P78543 158 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OC90Q02509 493 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 SKP2Q13309 424 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 EXT1Q16394 746 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 C2orf68Q2NKX9 166 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 GXYLT1Q4G148 440 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 WDR38Q5JTN6 314 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 TMEM225Q6GV28 225 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 PRSS41Q7RTY9 318 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 CPEB2Q7Z5Q1 589 aaKnown RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 CATSPERDQ86XM0 798 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR4N5Q8IXE1 308 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 BAP18Q8IXM2 172 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 GTPBP8Q8N3Z3 284 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ARHGEF39Q8N4T4 335 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ARRDC1Q8N5I2 433 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 COMMD1Q8N668 190 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ZFP62Q8NB50 900 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR4K17Q8NGC6 315 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR51D1Q8NGF3 324 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR51L1Q8NGJ5 315 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 OR6N2Q8NGY6 317 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 AQP3Q92482 292 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 PIK3IP1Q96FE7 263 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 Q96MF0 132 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 DGAT2Q96PD7 388 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 C1QTNF6Q9BXI9 259 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 TTTY10Q9BZA0 68 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 RAB18Q9NP72 206 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 B4GALT7Q9UBV7 327 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 ANAPC10Q9UM13 185 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 HHLA2Q9UM44 414 aa9.3□□□□□ -0.92
PDLIM1-205ENST00000493949 PCDHB10Q9UN67 800 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms