RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 ATPIF1Q9UII2 106 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 HSF4Q9ULV5 492 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 COLQQ9Y215 455 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 MEMO1Q9Y316 297 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 LOXL2Q9Y4K0 774 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 TRBV6-7A0A0A0MS04 114 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF716A6NP11 495 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 FAM25EA8MYX2 175 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 G3V3Y1 287 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 RRP8O43159 456 aaKnown RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 SPDEFO95238 335 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 CRHP06850 196 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 POU3F2P20265 443 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 CNR1P21554 472 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 RBP2P50120 134 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 MTCP1P56278 107 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 HYAL4Q2M3T9 481 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 KCTD9Q7L273 389 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 OVCH2Q7RTZ1 564 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 GGNQ86UU5 652 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 IQCF2Q8IXL9 164 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ESX1Q8N693 406 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 PXT1Q8NFP0 134 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 TMEM45BQ96B21 275 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 SGK3Q96BR1 496 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 SEC22AQ96IW7 307 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 REG4Q9BYZ8 158 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ELL3Q9HB65 397 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 CRLF2Q9HC73 371 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 RASL12Q9NYN1 266 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 C14orf166Q9Y224 244 aaKnown RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 TRIOO75962 3097 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ZSCAN5BA6NJL1 495 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 A8MXK9 166 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 CDK2AP1O14519 115 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 XRCC2O43543 280 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 CYTIPO60759 359 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 FGF2P09038 288 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 TMEM225BP0DP42 221 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 SERPINA2P20848 420 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 AVPR2P30518 371 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 NAAAQ02083 359 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 RSU1Q15404 277 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 YRDCQ86U90 279 aaKnown RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 LIN37Q96GY3 246 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 REEP6Q96HR9 211 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ADGRG7Q96K78 797 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 GUCD1Q96NT3 240 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 FOXB1Q99853 325 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ST6GALNAC5Q9BVH7 336 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 GPR87Q9BY21 358 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 PLEKHJ1Q9NW61 149 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 PARPBPQ9NWS1 579 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF230Q9UIE0 474 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-209ENST00000493732 SLC7A11Q9UPY5 501 aa8.44□□□□□ -1.06
NPHP3-209ENST00000493732 E9PLN8 166 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 CXCL13O43927 109 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 RAD51DO75771 328 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 TRAPPC6AO75865 159 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 LCATP04180 440 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 SERPINA5P05154 406 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 JMJD7P0C870 316 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 LIPCP11150 499 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF250P15622 560 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 DTYMKP23919 212 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 GDF1P27539 372 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 SERPINF1P36955 418 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 ATP1B3P54709 279 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 LRRC37A5PQ49AS3 106 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF468Q5VIY5 522 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 ASCL4Q6XD76 172 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 RAB11FIP2Q7L804 512 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 BVESQ8NE79 360 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 OR10D3Q8NH80 312 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 CT55Q8WUE5 264 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 PCNPQ8WW12 178 aaKnown RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 BORCS8Q96FH0 119 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 Q96M66 194 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 FAM173AQ9BQD7 235 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF471Q9BX82 626 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-209ENST00000493732 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 NARFLQ9H6Q4 476 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 P4HTMQ9NXG6 502 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 OSGIN2Q9Y236 505 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 TRIOBPQ9H2D6 2365 aa8.43□□□□□ -1.06
NPHP3-209ENST00000493732 CCDC187A0A096LP49 1063 aa8.42□□□□□ -1.06
NPHP3-209ENST00000493732 C13orf42A0A1B0GVH6 325 aa8.42□□□□□ -1.06
NPHP3-209ENST00000493732 A0A1W2PP11 408 aa8.42□□□□□ -1.06
NPHP3-209ENST00000493732 RNF222A6NCQ9 220 aa8.42□□□□□ -1.06
NPHP3-209ENST00000493732 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
NPHP3-209ENST00000493732 NUDT19A8MXV4 375 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms