RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PROB1E7EW31 1015 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 H3BSH0 61 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 AQP7O14520 342 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 AKR7A2O43488 359 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CREBL2O60519 120 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CEACAM4O75871 244 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 F10P00742 488 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CD74P04233 296 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SLC2A1P11166 492 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 ABOP16442 354 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CPT2P23786 658 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 MPGP29372 298 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CCL11P51671 97 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 FUT6P51993 359 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 ATP1B3P54709 279 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 QRFPP83859 136 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 PSG4Q00888 419 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 MRPL49Q13405 166 aaKnown RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CDK10Q15131 360 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 KISS1Q15726 138 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 EIF2S3LQ2VIR3 472 aaKnown RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 GFOD2Q3B7J2 385 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CDNFQ49AH0 187 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 RNASE12Q5GAN4 147 aaKnown RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 RNASE10Q5GAN6 216 aaKnown RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 TSPO2Q5TGU0 170 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 UNQ6126/PRO20091Q6UXV3 157 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 Q6ZTK2 550 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 P4HA3Q7Z4N8 544 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 GABRG1Q8N1C3 465 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SPICQ8N5J4 248 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CHST4Q8NCG5 386 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 CSNK2A3Q8NEV1 391 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 PRSS33Q8NF86 280 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 OR5L1Q8NGL2 311 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 FNDC9Q8TBE3 224 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SSC4DQ8WTU2 575 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 PIGTQ969N2 578 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SPSB4Q96A44 273 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 APOBEC3DQ96AK3 386 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 RAB3CQ96E17 227 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 ZNF486Q96H40 463 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 WDYHV1Q96HA8 205 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 REEP6Q96HR9 211 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 RADILQ96JH8 1075 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 ALKBH3Q96Q83 286 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 C1QTNF5Q9BXJ0 243 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 WNT5BQ9H1J7 359 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 SLC2A8Q9NY64 477 aa8.72□□□□□ -1.01
PRPF3-206ENST00000493553 NOP16Q9Y3C1 178 aaKnown RBP8.72□□□□□ -1.01
PRPF3-206ENST00000493553 MED12Q93074 2177 aa8.71□□□□□ -1.01
PRPF3-206ENST00000493553 A0A0B4J293 547 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF816-ZNF321PA0A0X1KG74 233 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 RAB27BO00194 218 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 NKX2-8O15522 239 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 IFNA6P05013 189 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GSTT2P0CG29 244 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 TUBG1P23258 451 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 OR3A2P47893 321 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GZMKP49863 264 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 RBP2P50120 134 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 CCR6P51684 374 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GNG2P59768 71 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 RPS27AP62979 156 aaKnown RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GK2Q14410 553 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 KCNJ8Q15842 424 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 RSPO1Q2MKA7 263 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF260Q3ZCT1 412 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 PLEKHN1Q494U1 663 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 PABPC1L2AQ5JQF8 200 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 LCE1DQ5T752 114 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 FBXW9Q5XUX1 488 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 SFRP4Q6FHJ7 346 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 IGFL3Q6UXB1 125 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GLDNQ6ZMI3 551 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 COLCA1Q6ZS62 124 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 NUFIP2Q7Z417 695 aaKnown RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 NAA40Q86UY6 237 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 TMEM17Q86X19 198 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 SKA3Q8IX90 412 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 TUSC5Q8IXB3 177 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 FAM89BQ8N5H3 189 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 ZSCAN4Q8NAM6 433 aaPredicted RBP8.71□□□□□ -1.02
PRPF3-206ENST00000493553 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GIMAP1Q8WWP7 306 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 GON7Q9BXV9 100 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 HES7Q9BYE0 225 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 METTL9Q9H1A3 318 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 CALHM2Q9HA72 323 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 SLC7A10Q9NS82 523 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 KCNN3Q9UGI6 736 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 RHBDD3Q9Y3P4 386 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 FAM186AA6NE01 2351 aa8.71□□□□□ -1.02
PRPF3-206ENST00000493553 MEIKINA0A087WXM9 373 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 AHRRA9YTQ3 701 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms