RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TCF7L1Q9HCS4 588 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 DYNLRB1Q9NP97 96 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 MRPL15Q9P015 296 aaKnown RBP11.43□□□□□ -0.58
MSH6-208ENST00000493177 ANXA2P2A6NMY6 339 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 PIN1P1O15428 100 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 SPRY3O43610 288 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 GMDSO60547 372 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 SC5DO75845 299 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 CST4P01036 141 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 CSF3P09919 207 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 UCHL1P09936 223 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 RAB3AP20336 220 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 EVX1P49640 407 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 ZNF81P51508 661 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 EFNA4P52798 201 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 CNN3Q15417 329 aaKnown RBP11.42□□□□□ -0.58
MSH6-208ENST00000493177 OR8G1Q15617 311 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 EFNB3Q15768 340 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 DMRTC1Q5HYR2 192 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 GDPGP1Q6ZNW5 385 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 PARP16Q8N5Y8 322 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 ZNF525Q8N782 197 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 OR1M1Q8NGA1 313 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 OR13G1Q8NGZ3 307 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 OR8S1Q8NH09 359 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 NPRL2Q8WTW4 380 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
MSH6-208ENST00000493177 KCTD7Q96MP8 289 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 CENPOQ9BU64 300 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 ADAT1Q9BUB4 502 aaKnown RBP11.42□□□□□ -0.58
MSH6-208ENST00000493177 CHST5Q9GZS9 411 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 PPP1R3EQ9H7J1 279 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 NEK6Q9HC98 313 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 CYSLTR2Q9NS75 346 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 FBXO9Q9UK97 447 aaPredicted RBP11.42□□□□□ -0.58
MSH6-208ENST00000493177 SLC7A11Q9UPY5 501 aa11.42□□□□□ -0.58
MSH6-208ENST00000493177 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 DPPA5A6NC42 116 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 M0R233 179 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 MAGEB3O15480 346 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 GABARAPO95166 117 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 MAS1P04201 325 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 NAT2P11245 290 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 ATF1P18846 271 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 FGF9P31371 208 aaPredicted RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 VBP1P61758 197 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 UTS2BQ765I0 119 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 OR10AD1Q8NGE0 317 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 TRMT10AQ8TBZ6 339 aaKnown RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 MICU1Q9BPX6 476 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 SLC30A2Q9BRI3 323 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 SLC22A4Q9H015 551 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 PPIL3Q9H2H8 161 aaKnown RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 ABCB9Q9NP78 766 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 CGGBP1Q9UFW8 167 aaPredicted RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 FOXJ3Q9UPW0 622 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 NOP16Q9Y3C1 178 aaKnown RBP11.41□□□□□ -0.58
MSH6-208ENST00000493177 MPC1Q9Y5U8 109 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 CEPT1Q9Y6K0 416 aa11.41□□□□□ -0.58
MSH6-208ENST00000493177 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 TRAV8-7A0A075B6U6 113 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 IGHV4-30-2A0A087WSY4 118 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 FAM230AA0A1W2PPH8 454 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 ZSCAN5BA6NJL1 495 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 H0YL77 283 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SULT1B1O43704 296 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 HCKP08631 526 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SLC25A16P16260 332 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SRMP19623 302 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 FSTP19883 344 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 TGFBR1P36897 503 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SERPINB10P48595 397 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 PDLIM4P50479 330 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 MMP15P51511 669 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 TMBIM6P55061 237 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 NCS1P62166 190 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 UBE2V2Q15819 145 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SWI5Q1ZZU3 235 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 TMEM42Q69YG0 159 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 Q6ZR03 302 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SLC16A12Q6ZSM3 486 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 OR51A2Q8NGJ7 313 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 UBASH3BQ8TF42 649 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 ELMOD3Q96FG2 381 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 RNF170Q96K19 258 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 TECTBQ96PL2 329 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SORCS2Q96PQ0 1159 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 PIMREGQ9BSJ6 248 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 NKIRAS2Q9NYR9 191 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 NDUFA13Q9P0J0 144 aa11.4□□□□□ -0.58
MSH6-208ENST00000493177 ZNF469Q96JG9 3925 aaPredicted RBP11.4□□□□□ -0.58
MSH6-208ENST00000493177 PLCE1Q9P212 2302 aa11.4□□□□□ -0.59
MSH6-208ENST00000493177 INAFM1C9JVW0 142 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms