RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 C1orf94Q6P1W5 598 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 GUSBP11Q6P575 273 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ST13P4Q8IZP2 240 aaPredicted RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 PNKDQ8N490 385 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 PRELID2Q8N945 189 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 LKAAEAR1Q8TD35 194 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 DTX3LQ8TDB6 740 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 RNASE6Q93091 150 aaKnown RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 RNF170Q96K19 258 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 FAIM2Q9BWQ8 316 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 DEFB126Q9BYW3 111 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 SRMSQ9H3Y6 488 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 HEBP2Q9Y5Z4 205 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 KPTNQ9Y664 436 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 SDK2Q58EX2 2172 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 A0A1B0GW55 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 A0A1W2PRF3 423 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 A0A1W2PRM7 423 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 PDZK1P1A8MUH7 402 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RAD51CO43502 376 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 HCRTR1O43613 425 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 MPDU1O75352 247 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 SERPINB7O75635 380 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NPPAP01160 153 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L2P0CJ85 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L3P0CJ86 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L4P0CJ87 422 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L5P0CJ88 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L6P0CJ89 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L7P0CJ90 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NR2C1P13056 603 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 GGT1P19440 569 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RAB3BP20337 219 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 APOC4P55056 127 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 PFN3P60673 137 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 LCN2P80188 198 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CST6Q15828 149 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4L9Q6RFH8 374 aaPredicted RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 METTL13Q8N6R0 699 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DNAAF3Q8N9W5 541 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ZNF485Q8NCK3 441 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RCN3Q96D15 328 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 TSC22D3Q99576 134 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NDEL1Q9GZM8 345 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 FBXO44Q9H4M3 255 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ARMC7Q9H6L4 198 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NTN4Q9HB63 628 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CTPS2Q9NRF8 586 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 DUX4Q9UBX2 424 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 MTRF1LQ9UGC7 380 aaKnown RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 ACACAQ13085 2346 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 BPTFQ12830 3046 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 A0A0G2JRQ6 117 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 A0A0J9YXY3 114 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR6C74A6NCV1 312 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 SIGLEC16A6NMB1 481 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR5K4A6NMS3 321 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 FAM189A1O60320 539 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CRYGCP07315 174 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RAB5AP20339 215 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RFC3P40938 356 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NPBWR2P48146 333 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ITIH4Q14624 930 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 GINS1Q14691 196 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 SLC1A5Q15758 541 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 SNCBQ16143 134 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 MRGPRG-AS1Q2M3A8 158 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 C14orf177Q52M58 125 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 MRPL21Q7Z2W9 205 aaKnown RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR4F15Q8NGB8 312 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR6Q1Q8NGQ2 317 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR6K6Q8NGW6 343 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 TCP10LQ8TDR4 215 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 TMEM54Q969K7 222 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NRIP2Q9BQI9 281 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 SUCNR1Q9BXA5 334 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CENPHQ9H3R5 247 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 TRIM49D1C9J1S8 452 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CETN3O15182 167 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CHST1O43916 411 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ICOSLGO75144 302 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CLDN11O75508 207 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RHOCP08134 193 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ATF6P18850 670 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 AP1S2P56377 157 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 MLF1P58340 268 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 RPS21P63220 83 aaKnown RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR7A5Q15622 319 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 OR10R2Q8NGX6 335 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 CHCHD10Q8WYQ3 142 aaPredicted RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 RASL11BQ9BPW5 248 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 BEX2Q9BXY8 128 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 NANOGQ9H9S0 305 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 PRSS16Q9NQE7 514 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 PAK5Q9P286 719 aa2.28□□□□□ -2.04
SNX13-209ENST00000492626 ZNF629Q9UEG4 869 aaPredicted RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 NXT1Q9UKK6 140 aaKnown RBP2.28□□□□□ -2.04
SNX13-209ENST00000492626 ICE1Q9Y2F5 2266 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms